Variant report

Variant	rs6517519
Chromosome Location	chr21:40540245-40540246
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr21:40539321..40542215-chr21:40543266..40546539,3	MCF-7	breast:
2	chr21:40481745..40484167-chr21:40539282..40541996,2	K562	blood:
3	chr21:40539973..40543967-chr21:40547698..40550109,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000235701	Chromatin interaction

Extended variants
information (count: 142 )
Associated
traits (count: 12 )

rSNPs within LD-proxies of this variant (count:140)

rs_ID	r²[population]
rs1041440	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10427502	0.84[AMR][1000 genomes]
rs1065242	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11088471	0.95[YRI][hapmap]
rs11910151	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11911112	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11911149	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12481860	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12482156	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12482181	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12482857	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12483216	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12710453	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs13047550	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13048178	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13049280	0.95[CEU][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes]
rs13052882	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs13339986	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes]
rs13625	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.94[MEX][hapmap];0.97[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.86[AMR][1000 genomes]
rs14194	1.00[ASW][hapmap];0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1541102	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.94[MEX][hapmap];0.97[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1571709	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1888488	0.92[ASW][hapmap];0.86[YRI][hapmap]
rs1984022	1.00[CEU][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2026265	1.00[CEU][hapmap];1.00[YRI][hapmap];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2026267	0.88[CEU][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.81[MEX][hapmap]
rs2037925	0.92[ASW][hapmap];0.86[YRI][hapmap]
rs2142111	0.85[YRI][hapmap]
rs2150413	0.85[ASW][hapmap];0.89[YRI][hapmap]
rs2150414	0.85[ASW][hapmap];0.89[YRI][hapmap]
rs2150415	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.97[LWK][hapmap];0.88[MEX][hapmap];0.96[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2234543	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.88[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2245455	0.92[ASW][hapmap];0.83[MEX][hapmap];0.81[YRI][hapmap]
rs2249651	1.00[JPT][hapmap]
rs2410123	0.92[ASW][hapmap];0.96[YRI][hapmap]
rs2735306	0.88[CEU][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap]
rs2776307	0.88[CEU][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap]
rs2776309	0.88[CEU][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap]
rs2836920	0.84[CEU][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.80[ASN][1000 genomes]
rs2836921	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2836923	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2836924	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836925	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836927	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836928	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836929	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836932	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2836933	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2836938	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2836944	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2836953	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2836955	0.96[CEU][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs2836956	0.85[ASW][hapmap];0.89[YRI][hapmap]
rs2836957	0.96[CEU][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2836958	0.85[ASW][hapmap];0.89[YRI][hapmap]
rs2836964	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.94[MEX][hapmap];0.97[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2836965	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.88[MEX][hapmap];0.96[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2836967	0.96[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2836968	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.94[MEX][hapmap];0.97[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2836972	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2836973	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2836974	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.88[MEX][hapmap];0.97[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes]
rs2836977	0.86[AMR][1000 genomes]
rs2836981	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs2836982	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs2836985	0.85[ASW][hapmap]
rs2836986	0.96[YRI][hapmap]
rs2836987	0.92[ASW][hapmap];0.96[YRI][hapmap]
rs2836988	0.92[ASW][hapmap];0.86[YRI][hapmap]
rs34035316	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs34176878	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34294410	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs34394827	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34433511	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs34478864	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34592564	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34672724	0.83[AMR][1000 genomes]
rs34978594	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35064900	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs35068861	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35386515	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35391055	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35560196	0.83[AMR][1000 genomes]
rs35571600	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs35774464	0.88[EUR][1000 genomes]
rs36113648	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs3945	1.00[CEU][hapmap];1.00[JPT][hapmap];0.98[EUR][1000 genomes]
rs418298	0.84[MEX][hapmap]
rs418359	0.84[MEX][hapmap]
rs419469	0.84[MEX][hapmap]
rs428602	0.89[YRI][hapmap]
rs4624474	0.92[ASW][hapmap];0.86[YRI][hapmap]
rs4817996	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55836299	0.86[AMR][1000 genomes]
rs56049536	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs56112725	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs56306759	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6517513	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6517514	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6517521	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6517523	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.88[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6517526	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.88[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6517527	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6517533	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6517538	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];0.88[MEX][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes]
rs66465538	0.81[EUR][1000 genomes]
rs68004583	0.84[AMR][1000 genomes]
rs68090597	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71184665	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7278297	0.89[YRI][hapmap]
rs7280375	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7281853	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs7282604	0.84[MEX][hapmap]
rs7282624	0.86[AMR][1000 genomes]
rs7283516	0.92[CEU][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap]
rs7283569	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs73221174	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73221193	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7354783	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs8127087	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8128026	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8128102	1.00[CEU][hapmap];0.96[YRI][hapmap];0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs8128191	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8128620	0.86[AMR][1000 genomes]
rs8128734	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs8128894	0.83[AMR][1000 genomes]
rs8129355	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs8129416	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs8130556	0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8130984	0.95[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs8131965	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs8132285	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs8132295	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8132333	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8132419	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8132568	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8133146	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs8134733	0.82[AMR][1000 genomes]
rs9941894	0.96[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap];0.81[EUR][1000 genomes]
rs9981301	0.85[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1061831	chr21:40376316-40583555	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
2	nsv544443	chr21:40376316-40583555	Enhancers Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases

mRNA abundance (count:12)

SNP	Gene	Cis/trans	Tissue	Source
rs6517519	PSMG1	cis	Muscle Skeletal	GTEx
rs6517519	PSMG1	cis	Esophagus Mucosa	GTEx
rs6517519	BRWD1	cis	parietal	SCAN
rs6517519	CLIC6	cis	parietal	SCAN
rs6517519	PIGP	cis	parietal	SCAN
rs6517519	PSMG1	cis	lymphoblastoid	seeQTL
rs6517519	PSMG1	cis	parietal	SCAN
rs6517519	BRWD1	cis	cerebellum	SCAN
rs6517519	DSCR3	cis	cerebellum	SCAN
rs6517519	HMGN1	cis	lymphoblastoid	seeQTL
rs6517519	PSMG1	cis	Skin Sun Exposed Lower leg	GTEx
rs6517519	DSCR2	cis	normal skin	skin_eQTL

Chromatin state (count:75 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:40533600-40545400	Weak transcription	HUVEC	blood vessel
2	chr21:40536400-40541200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr21:40536800-40541200	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr21:40537200-40541200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr21:40537200-40541200	Weak transcription	Adipose Nuclei	Adipose
6	chr21:40537200-40541200	Weak transcription	HSMMtube	muscle
7	chr21:40537200-40542800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr21:40537200-40543000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr21:40537200-40543000	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr21:40537200-40543000	Weak transcription	Lung	lung
11	chr21:40537200-40543000	Weak transcription	Pancreas	Pancrea
12	chr21:40537400-40541200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr21:40537400-40541200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr21:40537400-40541200	Weak transcription	Left Ventricle	heart
15	chr21:40537400-40542400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr21:40537400-40543000	Weak transcription	Aorta	Aorta
17	chr21:40537400-40543000	Weak transcription	Sigmoid Colon	Sigmoid Colon
18	chr21:40537400-40543200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
19	chr21:40537600-40541200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr21:40537600-40541200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr21:40537600-40541200	Weak transcription	NHEK	skin
22	chr21:40537600-40553800	Weak transcription	Pancreatic Islets	Pancreatic Islet
23	chr21:40537800-40541200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr21:40537800-40543000	Weak transcription	HepG2	liver
25	chr21:40538000-40541200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
26	chr21:40538000-40541200	Weak transcription	Dnd41	blood
27	chr21:40538000-40543000	Weak transcription	Duodenum Smooth Muscle	Duodenum
28	chr21:40538200-40541000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr21:40538200-40541200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr21:40538200-40541200	Weak transcription	Fetal Muscle Trunk	muscle
31	chr21:40538200-40541200	Weak transcription	Thymus	Thymus
32	chr21:40538200-40541400	Weak transcription	HUES64 Cell Line	embryonic stem cell
33	chr21:40538200-40543200	Weak transcription	Primary T helper cells fromperipheralblood	blood
34	chr21:40538400-40541200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr21:40538400-40541200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr21:40538400-40541200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
37	chr21:40538400-40541200	Weak transcription	Placenta	Placenta
38	chr21:40538400-40541200	Weak transcription	GM12878-XiMat	blood
39	chr21:40538400-40541400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
40	chr21:40538400-40542800	Weak transcription	Primary hematopoietic stem cells	blood
41	chr21:40538400-40543000	Weak transcription	Fetal Intestine Small	intestine
42	chr21:40538400-40544800	Weak transcription	H1 Cell Line	embryonic stem cell
43	chr21:40538600-40541200	Weak transcription	HMEC	breast
44	chr21:40538600-40541400	Weak transcription	Fetal Stomach	stomach
45	chr21:40538600-40543000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
46	chr21:40538600-40543000	Weak transcription	Skeletal Muscle Male	skeletal muscle
47	chr21:40538800-40541200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
48	chr21:40538800-40541200	Weak transcription	NHLF	lung
49	chr21:40538800-40541400	Weak transcription	A549	lung
50	chr21:40538800-40542800	Weak transcription	Duodenum Mucosa	Duodenum

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