The 2.0 version of rSNPBase

Variant report

Variant rs6524053
Chromosome Location chrX:80489551-80489552
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chrX:80459200-80492800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chrX:80459400-80503800 Weak transcription iPS-20b Cell Line embryonic stem cell
3 chrX:80459600-80490000 Weak transcription Primary hematopoietic stem cells blood
4 chrX:80459600-80492400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chrX:80459600-80496800 Weak transcription Primary B cells from cord blood blood
6 chrX:80459600-80497000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chrX:80460000-80493400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chrX:80460600-80492000 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chrX:80465600-80491600 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chrX:80468000-80492600 Weak transcription Primary B cells from peripheral blood blood
11 chrX:80469400-80497200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chrX:80471200-80490800 Weak transcription Primary monocytes fromperipheralblood blood
13 chrX:80471600-80491600 Weak transcription Monocytes-CD14+_RO01746 blood
14 chrX:80474600-80500600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chrX:80476000-80496000 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chrX:80477800-80496600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chrX:80479200-80496200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chrX:80479400-80493000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chrX:80479800-80491800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chrX:80480600-80492400 Weak transcription GM12878-XiMat blood
21 chrX:80482400-80497200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chrX:80484800-80492600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chrX:80485000-80493200 Weak transcription Gastric stomach
24 chrX:80485200-80493000 Weak transcription Fetal Stomach stomach
25 chrX:80485400-80492200 Weak transcription Primary T cells fromperipheralblood blood
26 chrX:80485400-80492600 Weak transcription Duodenum Mucosa Duodenum
27 chrX:80485400-80492800 Weak transcription Fetal Intestine Small intestine
28 chrX:80485400-80496400 Weak transcription Ovary ovary
29 chrX:80485600-80492800 Weak transcription Spleen Spleen
30 chrX:80485800-80493400 Weak transcription Primary T helper cells fromperipheralblood blood
31 chrX:80486000-80493800 Weak transcription Brain Angular Gyrus brain
32 chrX:80486600-80492400 Weak transcription Dnd41 blood
33 chrX:80486800-80493000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chrX:80486800-80503800 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chrX:80487800-80492400 Weak transcription Primary T cells from cord blood blood
36 chrX:80488800-80493400 Weak transcription Cortex derived primary cultured neurospheres brain
37 chrX:80489200-80494000 Weak transcription Colon Smooth Muscle Colon
38 chrX:80489400-80492800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chrX:80489400-80493000 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015