Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:81968116..81969902-chr3:81973558..81976369,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10779986	0.81[EUR][1000 genomes]
rs10779987	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11705789	0.82[EUR][1000 genomes]
rs1851918	0.86[EUR][1000 genomes]
rs1851926	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1851928	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1969433	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3772882	0.83[JPT][hapmap]
rs3772883	0.83[JPT][hapmap]
rs3860595	0.83[JPT][hapmap]
rs4411908	0.83[JPT][hapmap]
rs4479620	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4605572	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4618242	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4622918	0.81[EUR][1000 genomes]
rs6766011	0.87[EUR][1000 genomes]
rs6778265	0.87[EUR][1000 genomes]
rs6797240	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9817070	0.86[EUR][1000 genomes]
rs9820349	0.82[EUR][1000 genomes]
rs9854004	0.80[EUR][1000 genomes]
rs9870954	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9877408	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv999992	chr3:81693662-82015969	Active TSS Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
2	nsv536605	chr3:81693662-82015969	Flanking Active TSS Strong transcription Enhancers Weak transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:81963800-81969000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr3:81965200-81970200	Weak transcription	Fetal Heart	heart
3	chr3:81965200-81971400	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr3:81967400-81970000	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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