Variant report

Variant	rs6559653
Chromosome Location	chr9:72231070-72231071
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10120072	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1023201	1.00[AMR][1000 genomes]
rs10735558	1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10867701	1.00[AMR][1000 genomes]
rs1330335	1.00[AMR][1000 genomes]
rs1576510	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1581958	1.00[AMR][1000 genomes]
rs1999215	1.00[AMR][1000 genomes]
rs2026384	1.00[AMR][1000 genomes]
rs2309516	1.00[AMR][1000 genomes]
rs2781534	1.00[AMR][1000 genomes]
rs4409461	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4744573	0.82[ASW][hapmap];0.91[LWK][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4744916	1.00[AMR][1000 genomes]
rs4744925	0.84[YRI][hapmap];1.00[AMR][1000 genomes]
rs4744929	0.85[YRI][hapmap];1.00[AMR][1000 genomes]
rs56399720	1.00[AMR][1000 genomes]
rs7036621	1.00[AMR][1000 genomes]
rs7045100	1.00[AMR][1000 genomes]
rs7853119	0.82[ASW][hapmap];0.86[LWK][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7854208	1.00[AMR][1000 genomes]
rs7856525	0.82[ASW][hapmap];0.91[LWK][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7865174	1.00[AMR][1000 genomes]
rs7866895	1.00[AMR][1000 genomes]
rs7869217	1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs888601	0.82[ASW][hapmap];1.00[AMR][1000 genomes]
rs918338	1.00[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9410822	1.00[AMR][1000 genomes]
rs9410853	1.00[AMR][1000 genomes]
rs987417	1.00[AMR][1000 genomes]
rs987418	1.00[AMR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:72215600-72235200	Weak transcription	Aorta	Aorta
2	chr9:72219800-72242600	Weak transcription	Left Ventricle	heart
3	chr9:72221200-72237200	Weak transcription	Ovary	ovary
4	chr9:72226200-72231800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr9:72226200-72236800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr9:72226600-72234800	Weak transcription	Liver	Liver

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