Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:80197749..80200244-chr16:80208676..80210441,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10514487	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12102352	0.88[ASN][1000 genomes]
rs12102687	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12103210	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12598278	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs16952569	0.84[ASN][1000 genomes]
rs16952602	0.89[AMR][1000 genomes]
rs16952610	0.86[AMR][1000 genomes]
rs16952612	0.83[AMR][1000 genomes]
rs1862698	0.86[ASN][1000 genomes]
rs1871208	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs4889113	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs4889114	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs4889117	0.83[AMR][1000 genomes]
rs4889118	0.86[AMR][1000 genomes]
rs61540470	0.89[AMR][1000 genomes]
rs6564742	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73573845	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs74028037	0.86[AMR][1000 genomes]
rs7499082	0.84[AMR][1000 genomes]
rs8044077	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs8045802	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs8060581	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9934115	0.89[AMR][1000 genomes]
rs9941114	0.89[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833298	chr16:80122337-80314603	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1055982	chr16:80151604-80202923	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:80193200-80199600	Weak transcription	A549	lung
2	chr16:80193400-80199200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr16:80193600-80201400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr16:80193600-80207600	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr16:80193800-80201400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr16:80197000-80200800	Weak transcription	Fetal Kidney	kidney
7	chr16:80197800-80199800	Enhancers	Osteobl	bone
8	chr16:80197800-80200400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr16:80198000-80199200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr16:80198000-80201400	Weak transcription	Pancreas	Pancrea
11	chr16:80198200-80199400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr16:80198400-80199400	Weak transcription	HSMM	muscle

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