Variant report

Variant	rs6571694
Chromosome Location	chr14:35590310-35590311
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:24)
CpG islands
(count:0)
Chromatin interactive
region (count:13)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:24 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MYBL2	chr14:35590302-35592745	HepG2	liver:	n/a	n/a
2	POLR2A	chr14:35590240-35592733	MCF10A-Er-Src	breast:	n/a	n/a
3	YY1	chr14:35590273-35590661	GM12878	blood:	n/a	n/a
4	POLR2A	chr14:35590291-35592405	MCF-7	breast:	n/a	n/a
5	HA-E2F1	chr14:35590233-35592072	MCF-7	breast:	n/a	chr14:35591481-35591488 chr14:35591481-35591489 chr14:35591485-35591494 chr14:35591481-35591489
6	TBP	chr14:35590215-35592338	Hela-S3	cervix:	n/a	n/a
7	GTF3C2	chr14:35590144-35590896	Hela-S3	cervix:	n/a	n/a
8	FOS	chr14:35590248-35590485	MCF10A-Er-Src	breast:	n/a	n/a
9	POLR2A	chr14:35590105-35592819	MCF10A-Er-Src	breast:	n/a	n/a
10	FOS	chr14:35590296-35590448	MCF10A-Er-Src	breast:	n/a	n/a
11	POLR2A	chr14:35590060-35592253	Hela-S3	cervix:	n/a	n/a
12	FOS	chr14:35590289-35590455	MCF10A-Er-Src	breast:	n/a	n/a
13	TBP	chr14:35590219-35590327	K562	blood:	n/a	n/a
14	CEBPB	chr14:35590040-35590469	Hela-S3	cervix:	n/a	n/a
15	POLR2A	chr14:35590292-35592337	Hela-S3	cervix:	n/a	n/a
16	TAL1	chr14:35590184-35590357	K562	blood:	n/a	n/a
17	SIN3AK20	chr14:35590267-35592753	MCF-7	breast:	n/a	n/a
18	JUND	chr14:35590180-35590495	K562	blood:	n/a	n/a
19	HCFC1	chr14:35589880-35593328	Hela-S3	cervix:	n/a	n/a
20	FOS	chr14:35590256-35590489	MCF10A-Er-Src	breast:	n/a	n/a
21	YY1	chr14:35590142-35592380	SK-N-SH	brain:	n/a	chr14:35591676-35591690 chr14:35591276-35591298 chr14:35591728-35591739
22	POLR2A	chr14:35589863-35592461	Hela-S3	cervix:	n/a	n/a
23	POLR2A	chr14:35590293-35590612	HepG2	liver:	n/a	n/a
24	POLR2A	chr14:35590275-35592292	GM12892	blood:	n/a	n/a

No data

(count:13 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:35342738..35344659-chr14:35589687..35591484,2	K562	blood:
2	chr14:35450245..35452169-chr14:35590215..35593362,3	MCF-7	breast:
3	chr14:35514347..35518167-chr14:35589018..35591815,3	K562	blood:
4	chr14:35568810..35572401-chr14:35587846..35592624,4	MCF-7	breast:
5	chr14:35450042..35454830-chr14:35589505..35593708,8	K562	blood:
6	chr14:35450146..35454994-chr14:35588530..35593322,8	MCF-7	breast:
7	chr14:35589196..35594400-chr14:35871301..35877730,13	MCF-7	breast:
8	chr14:35513731..35517214-chr14:35589119..35593617,5	MCF-7	breast:
9	chr14:35450906..35453739-chr14:35588377..35591005,2	K562	blood:
10	chr14:35589240..35593864-chr14:35869008..35876501,20	MCF-7	breast:
11	chr14:35519480..35523190-chr14:35588742..35592990,5	MCF-7	breast:
12	chr14:35514347..35516079-chr14:35590063..35591815,2	K562	blood:
13	chr14:35512802..35518057-chr14:35589980..35593805,9	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000258790	TF binding region
KIAA0391	TF binding region
ENSG00000151327	Chromatin interaction
ENSG00000100906	Chromatin interaction
ENSG00000258738	Chromatin interaction
ENSG00000198604	Chromatin interaction
ENSG00000258704	Chromatin interaction
ENSG00000100883	Chromatin interaction

Extended variants
information (count: 157 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:130)

rs_ID	r²[population]
rs10047949	0.85[ASN][1000 genomes]
rs10131625	0.85[ASN][1000 genomes]
rs10132920	0.85[ASN][1000 genomes]
rs10134308	0.85[ASN][1000 genomes]
rs10136978	0.85[ASN][1000 genomes]
rs10137019	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs10142846	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs10144857	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs10146133	1.00[ASN][1000 genomes]
rs10146691	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs10149823	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs1064248	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs11156874	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11844031	0.81[ASN][1000 genomes]
rs11845364	0.85[ASN][1000 genomes]
rs11848309	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.86[TSI][hapmap];1.00[ASN][1000 genomes]
rs11850487	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.81[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs11852178	0.81[ASN][1000 genomes]
rs12100582	0.85[ASN][1000 genomes]
rs12100841	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.88[MEX][hapmap];0.89[TSI][hapmap];0.95[YRI][hapmap];0.97[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12100944	0.88[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs12100980	0.85[ASN][1000 genomes]
rs17103013	0.82[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs17103033	0.91[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17103044	0.91[ASW][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];0.89[YRI][hapmap];0.88[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs17103047	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.89[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs17103111	0.85[ASN][1000 genomes]
rs17103147	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs17103166	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs17386684	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17456067	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1807162	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs1884715	0.82[ASN][1000 genomes]
rs2005535	1.00[CHB][hapmap]
rs2008130	0.91[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2143948	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2143949	0.88[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs2277459	0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs2277461	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs2415258	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.85[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs2415278	0.85[ASN][1000 genomes]
rs2415284	1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs28470932	0.85[ASN][1000 genomes]
rs28504476	0.82[ASN][1000 genomes]
rs28595436	0.85[ASN][1000 genomes]
rs28665705	0.85[ASN][1000 genomes]
rs28708376	0.85[ASN][1000 genomes]
rs28736779	0.85[ASN][1000 genomes]
rs2899832	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs34509212	1.00[ASN][1000 genomes]
rs4494460	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.86[TSI][hapmap];1.00[ASN][1000 genomes]
rs55791227	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55890055	0.80[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs55907319	0.85[ASN][1000 genomes]
rs56142562	0.80[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs56363117	0.87[ASN][1000 genomes]
rs57166048	0.80[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs57411359	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58064181	0.81[ASN][1000 genomes]
rs60940685	0.88[ASN][1000 genomes]
rs61060564	0.91[ASN][1000 genomes]
rs61492899	0.87[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs62625039	1.00[ASN][1000 genomes]
rs6571695	0.88[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6571709	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs7140462	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7148424	0.85[ASN][1000 genomes]
rs7149602	0.85[ASN][1000 genomes]
rs7153807	0.85[ASN][1000 genomes]
rs7154292	0.91[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7154637	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs7155335	0.84[ASN][1000 genomes]
rs7155697	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.89[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs7156704	0.80[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs7156770	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7160889	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs7218	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs72664814	0.89[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs72664816	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs72664819	0.89[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs72664820	0.89[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs72664829	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs72664840	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72664843	1.00[ASN][1000 genomes]
rs72664849	0.92[ASN][1000 genomes]
rs72664854	1.00[ASN][1000 genomes]
rs72664855	1.00[ASN][1000 genomes]
rs72680648	0.87[ASN][1000 genomes]
rs72680652	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72680655	0.91[ASN][1000 genomes]
rs72680657	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72680662	0.91[ASN][1000 genomes]
rs72680663	0.80[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs73239026	0.82[ASN][1000 genomes]
rs73239030	0.82[ASN][1000 genomes]
rs73239072	0.85[ASN][1000 genomes]
rs73239074	0.85[ASN][1000 genomes]
rs73240720	0.81[ASN][1000 genomes]
rs743226	0.85[ASN][1000 genomes]
rs743227	0.85[ASN][1000 genomes]
rs7493705	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs8004236	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs8005079	0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs8007337	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs8007346	0.80[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs8007575	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8007822	0.85[ASN][1000 genomes]
rs8008066	0.82[ASW][hapmap];1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.94[YRI][hapmap];0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8009666	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs8010905	0.85[ASN][1000 genomes]
rs8011195	1.00[ASN][1000 genomes]
rs8011242	0.91[CEU][hapmap];0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8011549	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8012905	0.88[ASN][1000 genomes]
rs8014760	0.91[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.89[YRI][hapmap];0.89[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs8016140	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs8016541	0.89[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs8017547	0.82[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs8018116	0.89[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs8019182	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8019482	1.00[ASN][1000 genomes]
rs8019523	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs8019700	0.89[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs8019709	1.00[ASN][1000 genomes]
rs8019741	0.82[ASW][hapmap];0.91[GIH][hapmap];0.92[LWK][hapmap];0.93[TSI][hapmap];0.85[YRI][hapmap];0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs876996	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs9646144	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs9888560	0.89[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs9888561	0.89[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs9888597	0.89[AFR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:27 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949617	chr14:35379923-35825436	Enhancers Weak transcription Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	nsv1043470	chr14:35398522-35754029	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
3	nsv542031	chr14:35398522-35754029	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
4	nsv564264	chr14:35482797-35732369	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
5	nsv901615	chr14:35485748-35630175	Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
6	nsv870305	chr14:35488290-35852349	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
7	nsv1052800	chr14:35509858-35607117	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
8	nsv1044515	chr14:35510785-35756317	Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
9	nsv564265	chr14:35512335-35624831	Weak transcription Flanking Active TSS Active TSS Strong transcription Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
10	nsv1046992	chr14:35527239-35724227	Flanking Active TSS Strong transcription Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
11	nsv1051274	chr14:35529529-35724227	Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
12	nsv1048823	chr14:35537281-35724892	Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
13	nsv542032	chr14:35537281-35724892	Weak transcription Strong transcription Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
14	nsv1040540	chr14:35537481-35724753	Strong transcription Weak transcription Genic enhancers Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
15	nsv542033	chr14:35537481-35724753	Weak transcription Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
16	nsv1042625	chr14:35546094-35680358	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
17	nsv1050123	chr14:35546114-35724892	Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
18	nsv542034	chr14:35546114-35724892	Strong transcription Weak transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
19	nsv1050700	chr14:35548276-35639084	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
20	nsv1043692	chr14:35548276-35720016	Weak transcription Strong transcription Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
21	nsv1053604	chr14:35548276-35825805	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
22	nsv542035	chr14:35563220-35607117	Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
23	nsv1047992	chr14:35563220-35639084	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
24	nsv1052392	chr14:35563220-35893309	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	83 gene(s)	inside rSNPs	diseases
25	nsv542036	chr14:35563220-35893309	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	83 gene(s)	inside rSNPs	diseases
26	nsv1053978	chr14:35571762-35639084	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
27	nsv534182	chr14:35579022-35620232	Enhancers Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs6571694	FAM177A1	cis	cerebellum	SCAN
rs6571694	PPP2R3C	cis	lymphoblastoid	seeQTL
rs6571694	HECTD1	cis	parietal	SCAN
rs6571694	PPP2R3C	cis	parietal	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:35580800-35590600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr14:35581400-35590400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr14:35581400-35590400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr14:35581600-35590400	Weak transcription	Aorta	Aorta
5	chr14:35589400-35593000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr14:35589600-35590400	Enhancers	Primary B cells from peripheral blood	blood
7	chr14:35589600-35590400	Enhancers	Primary T killer memory cells from peripheral blood	blood
8	chr14:35589600-35590400	Enhancers	Spleen	Spleen
9	chr14:35589800-35590400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr14:35589800-35590400	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr14:35589800-35590400	Enhancers	Gastric	stomach
12	chr14:35589800-35590600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr14:35589800-35592200	Active TSS	Stomach Smooth Muscle	stomach
14	chr14:35589800-35592600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr14:35589800-35592600	Active TSS	Fetal Brain Female	brain
16	chr14:35589800-35593200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr14:35589800-35595000	Active TSS	K562	blood
18	chr14:35590000-35590400	Flanking Active TSS	Primary T cells from cord blood	blood
19	chr14:35590000-35590400	Flanking Active TSS	Liver	Liver
20	chr14:35590000-35590400	Flanking Active TSS	Brain Anterior Caudate	brain
21	chr14:35590000-35590400	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
22	chr14:35590000-35590400	Flanking Active TSS	Colonic Mucosa	Colon
23	chr14:35590000-35590400	Flanking Active TSS	Duodenum Mucosa	Duodenum
24	chr14:35590000-35590400	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
25	chr14:35590000-35590400	Enhancers	Fetal Heart	heart
26	chr14:35590000-35590400	Flanking Active TSS	Rectal Smooth Muscle	rectum
27	chr14:35590000-35590400	Enhancers	Skeletal Muscle Male	skeletal muscle
28	chr14:35590000-35590400	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
29	chr14:35590000-35590400	Flanking Active TSS	Osteobl	bone
30	chr14:35590000-35590600	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
31	chr14:35590000-35590600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
32	chr14:35590000-35590800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr14:35590000-35590800	Flanking Active TSS	Adipose Nuclei	Adipose
34	chr14:35590000-35591000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
35	chr14:35590000-35592400	Active TSS	Ovary	ovary
36	chr14:35590000-35592400	Active TSS	Right Ventricle	heart
37	chr14:35590000-35592400	Active TSS	NHLF	lung
38	chr14:35590000-35592600	Active TSS	HUES64 Cell Line	embryonic stem cell
39	chr14:35590000-35592800	Active TSS	HUES48 Cell Line	embryonic stem cell
40	chr14:35590000-35592800	Active TSS	Pancreatic Islets	Pancreatic Islet
41	chr14:35590000-35592800	Active TSS	A549	lung
42	chr14:35590000-35593000	Active TSS	H9 Cell Line	embryonic stem cell
43	chr14:35590000-35593000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr14:35590200-35590400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr14:35590200-35590400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr14:35590200-35590400	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr14:35590200-35590400	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
48	chr14:35590200-35590400	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
49	chr14:35590200-35590400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
50	chr14:35590200-35590400	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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