Variant report

Variant rs657259
Chromosome Location chr19:53141625-53141626
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53139800-53142000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr19:53140200-53142000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:53140200-53142000 Active TSS GM12878-XiMat blood
4 chr19:53140400-53142000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
5 chr19:53140400-53142400 Active TSS HUES6 Cell Line embryonic stem cell
6 chr19:53140400-53142600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr19:53140600-53141800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr19:53140600-53142000 Active TSS H1 Cell Line embryonic stem cell
9 chr19:53140600-53142000 Active TSS iPS-20b Cell Line embryonic stem cell
10 chr19:53140600-53142000 Active TSS Rectal Smooth Muscle rectum
11 chr19:53140600-53142200 Active TSS H9 Cell Line embryonic stem cell
12 chr19:53140600-53142200 Active TSS HUES64 Cell Line embryonic stem cell
13 chr19:53140600-53142200 Active TSS Pancreatic Islets Pancreatic Islet
14 chr19:53140600-53142200 Active TSS Rectal Mucosa Donor 29 rectum
15 chr19:53140600-53142400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
16 chr19:53140600-53142400 Active TSS Duodenum Smooth Muscle Duodenum
17 chr19:53140600-53142400 Active TSS Fetal Kidney kidney
18 chr19:53140600-53142400 Active TSS HSMM muscle
19 chr19:53140800-53141800 Active TSS Primary T cells from cord blood blood
20 chr19:53140800-53141800 Active TSS Left Ventricle heart
21 chr19:53140800-53141800 Active TSS Small Intestine intestine
22 chr19:53140800-53142000 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr19:53140800-53142000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr19:53140800-53142000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
25 chr19:53140800-53142000 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
26 chr19:53140800-53142000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
27 chr19:53140800-53142000 Active TSS Fetal Heart heart
28 chr19:53140800-53142000 Active TSS Fetal Intestine Large intestine
29 chr19:53140800-53142000 Active TSS Gastric stomach
30 chr19:53140800-53142000 Active TSS Stomach Mucosa stomach
31 chr19:53140800-53142000 Active TSS HepG2 liver
32 chr19:53140800-53142000 Active TSS NHDF-Ad bronchial
33 chr19:53140800-53142200 Active TSS ES-I3 Cell Line embryonic stem cell
34 chr19:53140800-53142200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr19:53140800-53142200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr19:53140800-53142200 Active TSS HUES48 Cell Line embryonic stem cell
37 chr19:53140800-53142200 Active TSS iPS-15b Cell Line embryonic stem cell
38 chr19:53140800-53142200 Active TSS Aorta Aorta
39 chr19:53140800-53142200 Active TSS Fetal Intestine Small intestine
40 chr19:53140800-53142200 Active TSS Ovary ovary
41 chr19:53140800-53142200 Active TSS Psoas Muscle Psoas
42 chr19:53140800-53142400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr19:53140800-53142400 Active TSS Brain Angular Gyrus brain
44 chr19:53140800-53142400 Active TSS Brain Substantia Nigra brain
45 chr19:53140800-53142400 Active TSS HSMMtube muscle
46 chr19:53140800-53142400 Active TSS NHLF lung
47 chr19:53141000-53141800 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr19:53141000-53141800 Active TSS Primary hematopoietic stem cells short term culture blood
49 chr19:53141000-53141800 Active TSS Primary T helper naive cells from peripheral blood blood
50 chr19:53141000-53141800 Active TSS Primary T helper cells PMA-I stimulated --

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