Variant report

Variant	rs6591563
Chromosome Location	chr11:60076211-60076212
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10750930	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10792261	0.88[ASN][1000 genomes]
rs1365246	0.80[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2194962	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4644658	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs585540	0.84[CHB][hapmap]
rs6591564	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs661376	0.84[CHB][hapmap]
rs662674	0.83[CHB][hapmap]
rs668095	0.84[CHB][hapmap]
rs668134	0.84[CHB][hapmap]
rs7104122	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7127750	0.80[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:60059200-60078400	Weak transcription	Primary B cells from cord blood	blood
2	chr11:60068200-60076600	Strong transcription	Monocytes-CD14+_RO01746	blood
3	chr11:60073800-60077800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr11:60074000-60078000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr11:60074600-60078400	Weak transcription	Adipose Nuclei	Adipose
6	chr11:60075400-60077200	Weak transcription	GM12878-XiMat	blood
7	chr11:60075400-60077600	Enhancers	HUVEC	blood vessel
8	chr11:60075400-60078600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr11:60075800-60077000	Weak transcription	HMEC	breast
10	chr11:60075800-60081000	Weak transcription	Placenta	Placenta
11	chr11:60076200-60077000	Weak transcription	Primary monocytes fromperipheralblood	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links