The 2.0 version of rSNPBase

Variant report

Variant rs664382
Chromosome Location chr11:17206519-17206520
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17156600-17219200 Weak transcription HSMMtube muscle
2 chr11:17158000-17215600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr11:17165200-17215200 Weak transcription Rectal Smooth Muscle rectum
4 chr11:17167400-17212600 Weak transcription Stomach Smooth Muscle stomach
5 chr11:17167400-17228000 Weak transcription Fetal Thymus thymus
6 chr11:17172600-17214600 Weak transcription Fetal Brain Female brain
7 chr11:17184800-17228800 Weak transcription Esophagus oesophagus
8 chr11:17185800-17207400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr11:17185800-17212800 Weak transcription Pancreas Pancrea
10 chr11:17187000-17212600 Weak transcription Brain Hippocampus Middle brain
11 chr11:17187000-17228000 Weak transcription Colonic Mucosa Colon
12 chr11:17187200-17207200 Weak transcription K562 blood
13 chr11:17187200-17210000 Weak transcription Psoas Muscle Psoas
14 chr11:17187200-17210000 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr11:17187200-17212600 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr11:17187200-17214000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr11:17187200-17214200 Weak transcription Right Ventricle heart
18 chr11:17187200-17226800 Weak transcription Small Intestine intestine
19 chr11:17191000-17207600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr11:17191000-17210000 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr11:17191000-17210200 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr11:17191000-17220600 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr11:17191200-17208600 Weak transcription GM12878-XiMat blood
24 chr11:17191200-17209800 Weak transcription Fetal Muscle Leg muscle
25 chr11:17191200-17210000 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr11:17191200-17210000 Weak transcription Fetal Muscle Trunk muscle
27 chr11:17191200-17212200 Weak transcription Primary hematopoietic stem cells blood
28 chr11:17191200-17212400 Weak transcription Primary B cells from peripheral blood blood
29 chr11:17191200-17212600 Weak transcription Duodenum Mucosa Duodenum
30 chr11:17191200-17213000 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr11:17191200-17213000 Weak transcription Dnd41 blood
32 chr11:17191200-17227800 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr11:17191400-17206600 Weak transcription Primary B cells from cord blood blood
34 chr11:17191400-17212800 Weak transcription Primary T cells fromperipheralblood blood
35 chr11:17191400-17213000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr11:17191400-17214400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr11:17191600-17212200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr11:17191800-17212400 Weak transcription HUES64 Cell Line embryonic stem cell
39 chr11:17191800-17212800 Weak transcription Fetal Kidney kidney
40 chr11:17192000-17214400 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr11:17192400-17214400 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr11:17192400-17217800 Weak transcription Stomach Mucosa stomach
43 chr11:17193200-17212400 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr11:17193800-17213000 Weak transcription NH-A brain
45 chr11:17194000-17209800 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr11:17194000-17210200 Weak transcription H1 Cell Line embryonic stem cell
47 chr11:17194000-17212400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr11:17194000-17212400 Weak transcription Hela-S3 cervix
49 chr11:17194000-17212600 Weak transcription Placenta Placenta
50 chr11:17194000-17212800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015