The 2.0 version of rSNPBase

Variant report

Variant rs66514362
Chromosome Location chr6:64345116-64345117
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:64343200-64345200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr6:64343400-64345200 Weak transcription Pancreas Pancrea
3 chr6:64344000-64345200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
4 chr6:64344200-64345200 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr6:64344600-64345200 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr6:64344600-64345200 Enhancers Fetal Intestine Large intestine
7 chr6:64344600-64345200 Enhancers Stomach Mucosa stomach
8 chr6:64344600-64345400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
9 chr6:64344600-64345400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr6:64344600-64345400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
11 chr6:64344600-64345400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
12 chr6:64344600-64345400 Flanking Active TSS Fetal Heart heart
13 chr6:64344600-64345400 Flanking Active TSS Fetal Lung lung
14 chr6:64344800-64345200 Flanking Active TSS HUES64 Cell Line embryonic stem cell
15 chr6:64344800-64345200 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
16 chr6:64344800-64345200 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
17 chr6:64344800-64345200 Enhancers Primary monocytes fromperipheralblood blood
18 chr6:64344800-64345200 Enhancers Primary Natural Killer cells fromperipheralblood blood
19 chr6:64344800-64345200 Enhancers Fetal Stomach stomach
20 chr6:64344800-64345400 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr6:64344800-64345400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
22 chr6:64344800-64345400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
23 chr6:64344800-64345400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
24 chr6:64344800-64345400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr6:64344800-64345400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
26 chr6:64344800-64345400 Flanking Active TSS Brain Cingulate Gyrus brain
27 chr6:64344800-64345400 Flanking Active TSS Dnd41 blood
28 chr6:64344800-64345400 Flanking Active TSS HepG2 liver
29 chr6:64344800-64345400 Flanking Active TSS K562 blood
30 chr6:64344800-64345600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
31 chr6:64344800-64347400 Active TSS Fetal Muscle Trunk muscle
32 chr6:64344800-64347800 Active TSS Thymus Thymus
33 chr6:64344800-64348000 Active TSS Stomach Smooth Muscle stomach
34 chr6:64345000-64345200 Flanking Active TSS ES-WA7 Cell Line embryonic stem cell
35 chr6:64345000-64345200 Flanking Active TSS H1 Cell Line embryonic stem cell
36 chr6:64345000-64345200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr6:64345000-64345200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr6:64345000-64345200 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
39 chr6:64345000-64345200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
40 chr6:64345000-64345200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr6:64345000-64345200 Active TSS Brain Substantia Nigra brain
42 chr6:64345000-64345200 Enhancers Placenta Placenta
43 chr6:64345000-64345200 Flanking Active TSS GM12878-XiMat blood
44 chr6:64345000-64345200 Enhancers HMEC breast
45 chr6:64345000-64345200 Active TSS NH-A brain
46 chr6:64345000-64345400 Flanking Active TSS HUES48 Cell Line embryonic stem cell
47 chr6:64345000-64345400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr6:64345000-64345400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr6:64345000-64345400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
50 chr6:64345000-64345400 Flanking Active TSS Primary B cells from cord blood blood

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Last update: Aug 31, 2015