Variant report

Variant rs66540474
Chromosome Location chr5:118618270-118618271
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118605400-118621000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr5:118610400-118619600 Genic enhancers Dnd41 blood
3 chr5:118610600-118619800 Weak transcription Aorta Aorta
4 chr5:118610600-118622600 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr5:118610800-118626000 Weak transcription Stomach Smooth Muscle stomach
6 chr5:118611200-118620400 Weak transcription A549 lung
7 chr5:118611200-118621000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr5:118611200-118623200 Weak transcription Fetal Intestine Small intestine
9 chr5:118611200-118625200 Weak transcription Right Atrium heart
10 chr5:118611400-118620400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr5:118611400-118621000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr5:118611400-118622600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr5:118611600-118621000 Weak transcription Muscle Satellite Cultured Cells --
14 chr5:118611800-118623200 Weak transcription HUVEC blood vessel
15 chr5:118612000-118619600 Enhancers Primary neutrophils fromperipheralblood blood
16 chr5:118612000-118622400 Weak transcription Lung lung
17 chr5:118612000-118625200 Weak transcription Fetal Muscle Leg muscle
18 chr5:118612400-118619800 Weak transcription Placenta Placenta
19 chr5:118612600-118620800 Weak transcription Stomach Mucosa stomach
20 chr5:118613200-118623400 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr5:118613800-118626000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr5:118614000-118623400 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr5:118614400-118619200 Genic enhancers Primary B cells from cord blood blood
24 chr5:118614400-118620800 Weak transcription Small Intestine intestine
25 chr5:118614400-118623200 Enhancers Primary T killer naive cells fromperipheralblood blood
26 chr5:118615000-118619600 Weak transcription Duodenum Mucosa Duodenum
27 chr5:118615000-118620800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr5:118615000-118622200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr5:118615000-118626200 Weak transcription Spleen Spleen
30 chr5:118615200-118619600 Weak transcription Gastric stomach
31 chr5:118615200-118621600 Genic enhancers Primary B cells from peripheral blood blood
32 chr5:118615200-118622400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr5:118616400-118618800 Enhancers Primary T helper naive cells fromperipheralblood blood
34 chr5:118616600-118618400 Enhancers Primary T helper naive cells from peripheral blood blood
35 chr5:118616600-118618800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr5:118616600-118620000 Genic enhancers Primary T regulatory cells fromperipheralblood blood
37 chr5:118616800-118624600 Enhancers Fetal Heart heart
38 chr5:118617000-118621000 Enhancers Primary T helper cells fromperipheralblood blood
39 chr5:118617400-118618400 Enhancers Primary hematopoietic stem cells blood
40 chr5:118617400-118619000 Strong transcription Hela-S3 cervix
41 chr5:118617600-118620000 Genic enhancers Monocytes-CD14+_RO01746 blood
42 chr5:118617600-118622400 Enhancers GM12878-XiMat blood
43 chr5:118617600-118622600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
44 chr5:118617800-118618400 Enhancers Adipose Nuclei Adipose
45 chr5:118617800-118618600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
46 chr5:118617800-118618600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr5:118617800-118619000 Genic enhancers Primary monocytes fromperipheralblood blood
48 chr5:118617800-118619400 Genic enhancers Primary hematopoietic stem cells short term culture blood
49 chr5:118617800-118619800 Genic enhancers Thymus Thymus
50 chr5:118617800-118621000 Enhancers K562 blood

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