The 2.0 version of rSNPBase

Variant report

Variant rs6660794
Chromosome Location chr1:94234557-94234558
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94220000-94254200 Weak transcription Aorta Aorta
2 chr1:94223000-94237000 Weak transcription NHEK skin
3 chr1:94229400-94234600 Enhancers Primary Natural Killer cells fromperipheralblood blood
4 chr1:94231600-94236000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr1:94231600-94236200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr1:94231600-94236200 Enhancers Fetal Thymus thymus
7 chr1:94233400-94235400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr1:94233400-94235800 Enhancers Placenta Placenta
9 chr1:94233400-94236000 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr1:94233400-94236200 Enhancers Fetal Intestine Large intestine
11 chr1:94233600-94234600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:94233600-94234800 Enhancers Muscle Satellite Cultured Cells --
13 chr1:94233600-94234800 Enhancers Brain Inferior Temporal Lobe brain
14 chr1:94233600-94234800 Enhancers Psoas Muscle Psoas
15 chr1:94233600-94235000 Enhancers Primary hematopoietic stem cells blood
16 chr1:94233600-94235000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:94233600-94235000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:94233600-94235000 Enhancers Lung lung
19 chr1:94233600-94235000 Enhancers Sigmoid Colon Sigmoid Colon
20 chr1:94233600-94235000 Enhancers Skeletal Muscle Female skeletal muscle
21 chr1:94233600-94235000 Enhancers HSMMtube muscle
22 chr1:94233600-94235200 Enhancers NHDF-Ad bronchial
23 chr1:94233600-94235400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:94233600-94235400 Enhancers Brain Anterior Caudate brain
25 chr1:94233600-94235400 Enhancers Skeletal Muscle Male skeletal muscle
26 chr1:94233600-94235400 Enhancers Hela-S3 cervix
27 chr1:94233600-94235600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:94233600-94235600 Enhancers H9 Cell Line embryonic stem cell
29 chr1:94233600-94235600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
30 chr1:94233600-94235800 Enhancers Right Atrium heart
31 chr1:94233600-94236000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr1:94233600-94236000 Enhancers iPS-18 Cell Line embryonic stem cell
33 chr1:94233600-94236000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
34 chr1:94233600-94236000 Enhancers Adipose Nuclei Adipose
35 chr1:94233600-94236000 Enhancers Fetal Adrenal Gland Adrenal Gland
36 chr1:94233600-94236000 Enhancers Fetal Muscle Trunk muscle
37 chr1:94233600-94236000 Enhancers Fetal Muscle Leg muscle
38 chr1:94233600-94236000 Enhancers Ovary ovary
39 chr1:94233600-94236200 Enhancers Fetal Intestine Small intestine
40 chr1:94233600-94238000 Genic enhancers HMEC breast
41 chr1:94233600-94239000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr1:94233800-94234600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr1:94233800-94234600 Enhancers NH-A brain
44 chr1:94233800-94234800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:94233800-94234800 Enhancers Fetal Stomach stomach
46 chr1:94233800-94234800 Enhancers Stomach Smooth Muscle stomach
47 chr1:94233800-94235000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
48 chr1:94233800-94235000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:94233800-94235000 Enhancers Osteobl bone
50 chr1:94233800-94235200 Enhancers Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015