Variant report

Variant	rs66650995
Chromosome Location	chr11:93687421-93687422
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:93680099..93683642-chr11:93684474..93688848,4	K562	blood:

Extended variants
information (count: 136 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:64)

rs_ID	r²[population]
rs1032934	0.81[ASN][1000 genomes]
rs1032935	0.84[ASN][1000 genomes]
rs10501811	0.93[ASN][1000 genomes]
rs10501813	1.00[EUR][1000 genomes]
rs11020587	0.84[ASN][1000 genomes]
rs1113700	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11825709	1.00[EUR][1000 genomes]
rs1401184	1.00[EUR][1000 genomes]
rs1589166	1.00[EUR][1000 genomes]
rs1605292	0.94[ASN][1000 genomes]
rs1605293	0.94[ASN][1000 genomes]
rs1607401	1.00[EUR][1000 genomes]
rs1894165	1.00[EUR][1000 genomes]
rs2019595	0.90[ASN][1000 genomes]
rs2102857	1.00[EUR][1000 genomes]
rs2176563	1.00[EUR][1000 genomes]
rs2203793	1.00[EUR][1000 genomes]
rs2213110	1.00[EUR][1000 genomes]
rs2460047	0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2460053	0.94[EUR][1000 genomes]
rs2460065	1.00[EUR][1000 genomes]
rs2460070	1.00[EUR][1000 genomes]
rs2462733	1.00[EUR][1000 genomes]
rs2462735	1.00[EUR][1000 genomes]
rs2462756	0.94[EUR][1000 genomes]
rs2462758	1.00[EUR][1000 genomes]
rs2462760	1.00[EUR][1000 genomes]
rs2511411	1.00[EUR][1000 genomes]
rs4590831	0.84[ASN][1000 genomes]
rs56938392	1.00[EUR][1000 genomes]
rs57214110	0.93[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs57367718	0.93[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs57586533	1.00[EUR][1000 genomes]
rs59013509	0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59689949	1.00[EUR][1000 genomes]
rs59793398	1.00[EUR][1000 genomes]
rs60539088	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61463513	0.93[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs66480929	1.00[EUR][1000 genomes]
rs66514329	1.00[EUR][1000 genomes]
rs66523751	1.00[EUR][1000 genomes]
rs66538341	0.94[EUR][1000 genomes]
rs66918645	1.00[EUR][1000 genomes]
rs66977226	1.00[EUR][1000 genomes]
rs67001808	0.94[EUR][1000 genomes]
rs67243356	0.94[EUR][1000 genomes]
rs67412659	1.00[EUR][1000 genomes]
rs67689846	0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs67926172	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67988338	1.00[EUR][1000 genomes]
rs68019383	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7102891	0.84[ASN][1000 genomes]
rs72962832	0.93[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs72962854	1.00[ASN][1000 genomes]
rs72964631	1.00[EUR][1000 genomes]
rs72964645	1.00[EUR][1000 genomes]
rs72964666	1.00[EUR][1000 genomes]
rs73564799	1.00[EUR][1000 genomes]
rs7932631	0.84[ASN][1000 genomes]
rs908754	0.90[ASN][1000 genomes]
rs978777	1.00[EUR][1000 genomes]
rs9787791	1.00[EUR][1000 genomes]
rs978950	0.84[ASN][1000 genomes]
rs989088	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:72 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508650	chr11:93609010-93713576	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
2	esv1796911	chr11:93642877-93688134	Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	nsv1049467	chr11:93651025-93778717	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv442	chr11:93665117-93717973	Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	esv1792094	chr11:93670388-93688541	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	esv1800503	chr11:93670388-93688541	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	esv1802331	chr11:93670388-93688541	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
8	esv1802534	chr11:93670388-93688541	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	esv1802586	chr11:93670388-93688541	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
10	esv1802849	chr11:93670388-93688541	Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	esv1798558	chr11:93671838-93688514	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
12	esv1796190	chr11:93676224-93688541	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
13	esv1796455	chr11:93676224-93688541	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
14	esv1799544	chr11:93676224-93688541	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
15	esv1802919	chr11:93676224-93688541	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
16	esv2757466	chr11:93676224-93714950	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
17	esv2759854	chr11:93676224-93714950	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
18	nsv555942	chr11:93682348-93688514	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
19	esv3474808	chr11:93682904-93687802	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
20	esv3474819	chr11:93682904-93687802	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
21	esv3464597	chr11:93683190-93688673	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
22	esv3464575	chr11:93683245-93688641	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
23	esv21094	chr11:93683253-93688561	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
24	esv3464586	chr11:93683255-93688634	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
25	esv3464608	chr11:93683264-93688592	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
26	esv989117	chr11:93683297-93688586	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
27	esv3464620	chr11:93683329-93688565	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
28	esv1011018	chr11:93683377-93688561	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
29	esv1792605	chr11:93683440-93687965	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
30	esv1799603	chr11:93683440-93687965	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
31	esv1797485	chr11:93683453-93688541	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
32	esv1799456	chr11:93683453-93688541	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
33	esv1799981	chr11:93683453-93688541	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
34	esv1801198	chr11:93683453-93688541	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
35	esv1802692	chr11:93683453-93688541	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
36	esv1803959	chr11:93683635-93689075	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
37	esv1800894	chr11:93683635-93691161	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
38	nsv555945	chr11:93683680-93687449	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
39	nsv555946	chr11:93683680-93687780	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
40	nsv555947	chr11:93683680-93688134	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
41	esv1793438	chr11:93683680-93688514	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
42	esv1793545	chr11:93683680-93688514	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
43	esv1796721	chr11:93683680-93688514	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
44	esv1804035	chr11:93683680-93688514	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
45	nsv555948	chr11:93683680-93688514	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
46	nsv555949	chr11:93683680-93690148	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
47	nsv555951	chr11:93683768-93687780	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
48	nsv555952	chr11:93683768-93688134	Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
49	esv1792433	chr11:93683768-93688514	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
50	esv1795230	chr11:93683768-93688514	Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:93687000-93687800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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