The 2.0 version of rSNPBase

Variant report

Variant rs6672265
Chromosome Location chr1:172852913-172852914
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172840600-172855200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:172850600-172856800 Enhancers HUVEC blood vessel
3 chr1:172851600-172853000 Enhancers Psoas Muscle Psoas
4 chr1:172851800-172853600 Enhancers Primary T helper 17 cells PMA-I stimulated --
5 chr1:172852000-172853200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:172852000-172853200 Enhancers NHDF-Ad bronchial
7 chr1:172852000-172853400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
8 chr1:172852000-172853600 Enhancers Primary T helper naive cells from peripheral blood blood
9 chr1:172852000-172855600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:172852000-172855600 Enhancers HSMM muscle
11 chr1:172852200-172853200 Enhancers Primary Natural Killer cells fromperipheralblood blood
12 chr1:172852200-172853200 Enhancers Fetal Thymus thymus
13 chr1:172852200-172853400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr1:172852200-172853400 Enhancers NH-A brain
15 chr1:172852200-172853600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:172852200-172853600 Enhancers Primary T cells fromperipheralblood blood
17 chr1:172852200-172853800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr1:172852200-172854000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:172852200-172854000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:172852200-172854800 Enhancers Skeletal Muscle Female skeletal muscle
21 chr1:172852200-172855200 Enhancers HSMMtube muscle
22 chr1:172852200-172855400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:172852200-172855400 Enhancers Muscle Satellite Cultured Cells --
24 chr1:172852200-172855600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:172852400-172853000 Enhancers Primary T cells from cord blood blood
26 chr1:172852400-172853000 Enhancers Primary T killer memory cells from peripheral blood blood
27 chr1:172852400-172853200 Enhancers Fetal Muscle Leg muscle
28 chr1:172852400-172853200 Flanking Active TSS Dnd41 blood
29 chr1:172852400-172853600 Enhancers Primary B cells from peripheral blood blood
30 chr1:172852400-172853600 Enhancers Primary T helper cells fromperipheralblood blood
31 chr1:172852400-172854000 Enhancers Primary hematopoietic stem cells blood
32 chr1:172852400-172854200 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr1:172852400-172855800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:172852600-172853000 Enhancers Thymus Thymus
35 chr1:172852600-172853200 Enhancers Rectal Mucosa Donor 29 rectum
36 chr1:172852600-172853200 Flanking Active TSS Osteobl bone
37 chr1:172852600-172853400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr1:172852600-172853600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
39 chr1:172852600-172853800 Enhancers Primary T helper cells PMA-I stimulated --
40 chr1:172852600-172862400 Weak transcription Pancreas Pancrea
41 chr1:172852800-172853200 Enhancers GM12878-XiMat blood
42 chr1:172852800-172853200 Enhancers NHLF lung
43 chr1:172852800-172853400 Enhancers Duodenum Mucosa Duodenum
44 chr1:172852800-172854600 Weak transcription Right Atrium heart
45 chr1:172852800-172857000 Enhancers Stomach Mucosa stomach

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Last update: Aug 31, 2015