The 2.0 version of rSNPBase

Variant report

Variant rs6676051
Chromosome Location chr1:220823071-220823072
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220767800-220826400 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr1:220778800-220837200 Weak transcription NHEK skin
3 chr1:220782800-220825800 Weak transcription Fetal Brain Male brain
4 chr1:220784200-220836600 Weak transcription Fetal Lung lung
5 chr1:220791200-220828600 Weak transcription Right Ventricle heart
6 chr1:220791200-220841200 Weak transcription HMEC breast
7 chr1:220792000-220834200 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr1:220796200-220827800 Weak transcription Gastric stomach
9 chr1:220798000-220836400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr1:220798800-220826200 Weak transcription Brain Angular Gyrus brain
11 chr1:220799600-220827000 Weak transcription Stomach Smooth Muscle stomach
12 chr1:220800000-220837800 Weak transcription Esophagus oesophagus
13 chr1:220800800-220826400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:220802400-220826400 Weak transcription H9 Cell Line embryonic stem cell
15 chr1:220805200-220827200 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr1:220807400-220829800 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr1:220807800-220828800 Weak transcription Colon Smooth Muscle Colon
18 chr1:220807800-220836400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:220809400-220823200 Weak transcription Left Ventricle heart
20 chr1:220809400-220827000 Weak transcription Brain Anterior Caudate brain
21 chr1:220810800-220826200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:220811800-220825400 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr1:220813600-220836000 Weak transcription Brain Cingulate Gyrus brain
24 chr1:220815000-220827800 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr1:220815800-220826600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:220815800-220837200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr1:220816000-220823200 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:220816000-220823200 Weak transcription Adipose Nuclei Adipose
29 chr1:220816000-220827000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:220816000-220828000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr1:220816200-220823200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr1:220816200-220823800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:220816200-220824800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:220816200-220825200 Weak transcription Fetal Stomach stomach
35 chr1:220816200-220826400 Weak transcription H1 Cell Line embryonic stem cell
36 chr1:220816200-220827000 Weak transcription Aorta Aorta
37 chr1:220816200-220836200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:220816400-220827000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:220816600-220823400 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr1:220816600-220823400 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr1:220816600-220834200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr1:220816600-220836000 Weak transcription Fetal Kidney kidney
43 chr1:220816800-220823200 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr1:220816800-220823400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr1:220816800-220825800 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr1:220816800-220826400 Weak transcription Fetal Muscle Trunk muscle
47 chr1:220816800-220826400 Weak transcription Fetal Muscle Leg muscle
48 chr1:220817000-220823200 Weak transcription Fetal Brain Female brain
49 chr1:220817200-220826200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:220818800-220823200 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015