Variant report

Variant rs6677770
Chromosome Location chr1:94066635-94066636
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94025600-94073800 Weak transcription Fetal Brain Female brain
2 chr1:94057400-94068000 Genic enhancers HSMM muscle
3 chr1:94057400-94069200 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr1:94057400-94071000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr1:94057600-94106400 Weak transcription Primary B cells from cord blood blood
6 chr1:94058400-94068800 Weak transcription Small Intestine intestine
7 chr1:94058600-94068000 Enhancers Skeletal Muscle Female skeletal muscle
8 chr1:94059600-94066800 Enhancers Brain Anterior Caudate brain
9 chr1:94060200-94078800 Weak transcription Colonic Mucosa Colon
10 chr1:94061200-94078800 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr1:94061400-94067200 Enhancers Right Ventricle heart
12 chr1:94062000-94067200 Enhancers Left Ventricle heart
13 chr1:94062400-94067400 Enhancers HMEC breast
14 chr1:94062600-94070000 Weak transcription Osteobl bone
15 chr1:94062600-94073000 Weak transcription Primary B cells from peripheral blood blood
16 chr1:94063600-94069600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:94064200-94067600 Genic enhancers NHEK skin
18 chr1:94064200-94069400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:94064400-94067400 Genic enhancers HepG2 liver
20 chr1:94064400-94073800 Weak transcription Aorta Aorta
21 chr1:94064400-94074200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr1:94064600-94067200 Enhancers Lung lung
23 chr1:94064600-94068800 Weak transcription HSMMtube muscle
24 chr1:94064800-94066800 Genic enhancers Right Atrium heart
25 chr1:94064800-94068600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr1:94064800-94070400 Weak transcription NH-A brain
27 chr1:94064800-94073200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr1:94065000-94070000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:94065000-94070000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:94065000-94071000 Weak transcription Colon Smooth Muscle Colon
31 chr1:94065000-94071200 Weak transcription HUVEC blood vessel
32 chr1:94065000-94073800 Weak transcription Esophagus oesophagus
33 chr1:94065000-94073800 Weak transcription Rectal Smooth Muscle rectum
34 chr1:94065200-94068800 Weak transcription Muscle Satellite Cultured Cells --
35 chr1:94065200-94069800 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr1:94065200-94071000 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr1:94065600-94068000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:94065800-94067200 Enhancers Gastric stomach
39 chr1:94065800-94067400 Enhancers Duodenum Mucosa Duodenum
40 chr1:94065800-94070000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:94066000-94067200 Enhancers Liver Liver
42 chr1:94066000-94070000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:94066200-94066800 Enhancers Pancreas Pancrea
44 chr1:94066200-94067400 Enhancers A549 lung
45 chr1:94066200-94068000 Enhancers Stomach Mucosa stomach
46 chr1:94066200-94069400 Weak transcription ES-WA7 Cell Line embryonic stem cell
47 chr1:94066200-94073800 Weak transcription Fetal Stomach stomach
48 chr1:94066400-94067200 Genic enhancers Rectal Mucosa Donor 31 rectum
49 chr1:94066400-94067400 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr1:94066400-94067800 Weak transcription Fetal Intestine Large intestine

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