The 2.0 version of rSNPBase

Variant report

Variant rs6681027
Chromosome Location chr1:92846583-92846584
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92765800-92850000 Weak transcription Small Intestine intestine
2 chr1:92792600-92846600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr1:92792800-92850800 Weak transcription Fetal Heart heart
4 chr1:92795200-92846600 Weak transcription Gastric stomach
5 chr1:92795200-92850200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:92795200-92851400 Weak transcription Spleen Spleen
7 chr1:92798200-92846800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:92804400-92853200 Weak transcription NHEK skin
9 chr1:92815000-92853200 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:92816000-92851400 Weak transcription A549 lung
11 chr1:92816400-92846800 Weak transcription Primary monocytes fromperipheralblood blood
12 chr1:92817400-92851400 Weak transcription Rectal Smooth Muscle rectum
13 chr1:92818000-92851600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr1:92818000-92852600 Weak transcription Colon Smooth Muscle Colon
15 chr1:92818200-92851600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr1:92818800-92853000 Weak transcription Osteobl bone
17 chr1:92823600-92853200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:92823800-92846600 Weak transcription Brain Cingulate Gyrus brain
19 chr1:92824000-92846600 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr1:92824000-92846600 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr1:92824000-92851400 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr1:92824400-92850200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:92824400-92851400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:92824400-92852400 Weak transcription Colonic Mucosa Colon
25 chr1:92824600-92850200 Weak transcription Fetal Brain Female brain
26 chr1:92824600-92851400 Weak transcription Brain Substantia Nigra brain
27 chr1:92824600-92851400 Weak transcription Placenta Placenta
28 chr1:92824600-92851400 Weak transcription NHDF-Ad bronchial
29 chr1:92825400-92849800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr1:92825400-92851400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr1:92825600-92851400 Weak transcription Fetal Kidney kidney
32 chr1:92825600-92852400 Weak transcription HepG2 liver
33 chr1:92825600-92852800 Weak transcription HMEC breast
34 chr1:92825800-92850200 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr1:92826000-92850400 Weak transcription Lung lung
36 chr1:92826000-92851400 Weak transcription HSMMtube muscle
37 chr1:92826000-92852600 Weak transcription Brain Anterior Caudate brain
38 chr1:92826200-92849400 Weak transcription Fetal Stomach stomach
39 chr1:92826200-92853000 Weak transcription Fetal Brain Male brain
40 chr1:92826400-92846600 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr1:92826400-92846600 Weak transcription Stomach Smooth Muscle stomach
42 chr1:92826600-92850200 Weak transcription Fetal Muscle Leg muscle
43 chr1:92830400-92849800 Weak transcription Fetal Intestine Small intestine
44 chr1:92830600-92851400 Weak transcription Muscle Satellite Cultured Cells --
45 chr1:92833400-92855000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr1:92833400-92856000 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr1:92833600-92846800 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr1:92833600-92852600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr1:92833600-92852800 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr1:92834000-92851400 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015