Variant report
| Variant | rs6683456 |
|---|---|
| Chromosome Location | chr1:92917615-92917616 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:69)
| rs_ID | r2[population] |
|---|---|
| rs10399671 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs11164423 | 0.84[AFR][1000 genomes] |
| rs12070923 | 0.84[AFR][1000 genomes] |
| rs12075168 | 1.00[EUR][1000 genomes] |
| rs12075243 | 1.00[EUR][1000 genomes] |
| rs12090761 | 0.87[AFR][1000 genomes] |
| rs12098095 | 1.00[EUR][1000 genomes] |
| rs17131632 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs17131636 | 1.00[EUR][1000 genomes] |
| rs41286805 | 0.87[EUR][1000 genomes] |
| rs41296171 | 0.87[EUR][1000 genomes] |
| rs41313389 | 0.87[EUR][1000 genomes] |
| rs55993081 | 1.00[EUR][1000 genomes] |
| rs56112620 | 0.88[AMR][1000 genomes] |
| rs56297403 | 0.87[EUR][1000 genomes] |
| rs56665661 | 0.87[AFR][1000 genomes] |
| rs57177520 | 0.87[EUR][1000 genomes] |
| rs57217458 | 0.87[EUR][1000 genomes] |
| rs57992264 | 0.81[AFR][1000 genomes] |
| rs58142139 | 0.87[EUR][1000 genomes] |
| rs59278612 | 0.87[EUR][1000 genomes] |
| rs60265386 | 0.87[EUR][1000 genomes] |
| rs60550001 | 0.87[EUR][1000 genomes] |
| rs60755573 | 0.87[EUR][1000 genomes] |
| rs60933677 | 0.83[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs61141829 | 0.87[EUR][1000 genomes] |
| rs61185080 | 0.87[EUR][1000 genomes] |
| rs61410146 | 0.87[EUR][1000 genomes] |
| rs6603970 | 0.89[AFR][1000 genomes] |
| rs6661028 | 0.87[EUR][1000 genomes] |
| rs6662381 | 0.84[AFR][1000 genomes] |
| rs6672838 | 1.00[EUR][1000 genomes] |
| rs6679419 | 0.83[AMR][1000 genomes] |
| rs6681027 | 0.81[AFR][1000 genomes] |
| rs6681213 | 0.87[EUR][1000 genomes] |
| rs6695475 | 0.87[EUR][1000 genomes] |
| rs6702975 | 0.87[EUR][1000 genomes] |
| rs6704484 | 0.87[EUR][1000 genomes] |
| rs72958740 | 0.87[EUR][1000 genomes] |
| rs72958746 | 0.87[EUR][1000 genomes] |
| rs72958774 | 0.87[EUR][1000 genomes] |
| rs72958781 | 0.87[EUR][1000 genomes] |
| rs72958796 | 0.87[EUR][1000 genomes] |
| rs72960815 | 0.87[EUR][1000 genomes] |
| rs72960831 | 0.87[EUR][1000 genomes] |
| rs72960835 | 0.87[EUR][1000 genomes] |
| rs72960847 | 0.87[EUR][1000 genomes] |
| rs72960860 | 0.87[EUR][1000 genomes] |
| rs72960870 | 0.87[EUR][1000 genomes] |
| rs72960872 | 0.83[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs72962640 | 0.87[EUR][1000 genomes] |
| rs72962659 | 1.00[EUR][1000 genomes] |
| rs74101123 | 0.87[EUR][1000 genomes] |
| rs74101131 | 0.87[EUR][1000 genomes] |
| rs74101133 | 0.87[EUR][1000 genomes] |
| rs74101146 | 0.87[EUR][1000 genomes] |
| rs74101152 | 0.87[EUR][1000 genomes] |
| rs74101157 | 0.87[EUR][1000 genomes] |
| rs74102853 | 0.87[EUR][1000 genomes] |
| rs74102861 | 0.87[EUR][1000 genomes] |
| rs7513631 | 0.87[EUR][1000 genomes] |
| rs7519603 | 0.87[EUR][1000 genomes] |
| rs7520555 | 0.87[EUR][1000 genomes] |
| rs7520675 | 1.00[EUR][1000 genomes] |
| rs7525174 | 0.87[EUR][1000 genomes] |
| rs7527960 | 1.00[EUR][1000 genomes] |
| rs7529971 | 0.87[EUR][1000 genomes] |
| rs7534750 | 0.88[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs7535181 | 0.81[AFR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:92913800-92920800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
