The 2.0 version of rSNPBase

Variant report

Variant rs6684356
Chromosome Location chr1:211501459-211501460
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211499600-211501800 Active TSS HSMM muscle
2 chr1:211499600-211502200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr1:211499800-211501800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:211499800-211501800 Active TSS Aorta Aorta
5 chr1:211499800-211501800 Active TSS HSMMtube muscle
6 chr1:211500000-211501600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr1:211500000-211501600 Active TSS GM12878-XiMat blood
8 chr1:211500000-211501800 Active TSS HUES6 Cell Line embryonic stem cell
9 chr1:211500000-211501800 Active TSS Brain Anterior Caudate brain
10 chr1:211500000-211501800 Active TSS Pancreas Pancrea
11 chr1:211500400-211502000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
12 chr1:211500400-211502200 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
13 chr1:211500400-211504000 Flanking Active TSS Primary B cells from cord blood blood
14 chr1:211500600-211502000 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
15 chr1:211500600-211502200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr1:211500800-211501600 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
17 chr1:211500800-211501600 Flanking Active TSS Fetal Thymus thymus
18 chr1:211500800-211501800 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
19 chr1:211500800-211501800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:211500800-211501800 Flanking Active TSS Skeletal Muscle Male skeletal muscle
21 chr1:211500800-211501800 Flanking Active TSS Thymus Thymus
22 chr1:211500800-211502000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr1:211500800-211502000 Enhancers Spleen Spleen
24 chr1:211500800-211502200 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
25 chr1:211500800-211502200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
26 chr1:211500800-211502200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
27 chr1:211500800-211503600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
28 chr1:211500800-211503600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
29 chr1:211500800-211503600 Flanking Active TSS Duodenum Mucosa Duodenum
30 chr1:211501000-211501600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
31 chr1:211501000-211501600 Flanking Active TSS HUES64 Cell Line embryonic stem cell
32 chr1:211501000-211501600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:211501000-211501600 Weak transcription Gastric stomach
34 chr1:211501000-211501600 Flanking Active TSS NHLF lung
35 chr1:211501000-211502600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr1:211501000-211503400 Flanking Active TSS Primary B cells from peripheral blood blood
37 chr1:211501000-211503400 Enhancers Cortex derived primary cultured neurospheres brain
38 chr1:211501000-211503400 Flanking Active TSS Stomach Smooth Muscle stomach
39 chr1:211501000-211503600 Flanking Active TSS Primary T cells fromperipheralblood blood
40 chr1:211501000-211503600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
41 chr1:211501000-211503600 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
42 chr1:211501000-211504000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr1:211501200-211501600 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
44 chr1:211501200-211501600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr1:211501200-211501600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
46 chr1:211501200-211501600 Flanking Active TSS Fetal Stomach stomach
47 chr1:211501200-211501600 Enhancers Placenta Amnion Placenta Amnion
48 chr1:211501200-211501600 Weak transcription Right Atrium heart
49 chr1:211501200-211501800 Flanking Active TSS Duodenum Smooth Muscle Duodenum
50 chr1:211501200-211501800 Weak transcription Ovary ovary

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015