Variant report

Variant	rs66850941
Chromosome Location	chr8:110187203-110187204
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs16879261	1.00[ASN][1000 genomes]
rs16879277	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16879288	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16879296	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs16879302	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs16879319	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1993593	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4489305	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs58645331	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59395166	1.00[ASN][1000 genomes]
rs59606309	1.00[ASN][1000 genomes]
rs59943608	1.00[ASN][1000 genomes]
rs60785810	1.00[ASN][1000 genomes]
rs61245151	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61479312	1.00[ASN][1000 genomes]
rs66514810	1.00[ASN][1000 genomes]
rs66540106	1.00[ASN][1000 genomes]
rs66582255	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66595116	1.00[ASN][1000 genomes]
rs66597282	1.00[ASN][1000 genomes]
rs66894192	1.00[ASN][1000 genomes]
rs66993652	1.00[ASN][1000 genomes]
rs67013559	1.00[ASN][1000 genomes]
rs67022633	1.00[ASN][1000 genomes]
rs67131445	1.00[ASN][1000 genomes]
rs67145203	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67220317	1.00[ASN][1000 genomes]
rs67285523	1.00[ASN][1000 genomes]
rs67650612	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67741834	1.00[ASN][1000 genomes]
rs67743002	0.86[ASN][1000 genomes]
rs67793872	1.00[ASN][1000 genomes]
rs67919153	1.00[ASN][1000 genomes]
rs67974558	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs68134891	1.00[ASN][1000 genomes]
rs6990184	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6994530	1.00[ASN][1000 genomes]
rs72680756	1.00[ASN][1000 genomes]
rs72682635	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72682688	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73303253	1.00[ASN][1000 genomes]
rs73303256	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73311376	1.00[ASN][1000 genomes]
rs73311383	0.94[ASN][1000 genomes]
rs73311385	1.00[ASN][1000 genomes]
rs73311386	1.00[ASN][1000 genomes]
rs73311387	1.00[ASN][1000 genomes]
rs73311394	1.00[ASN][1000 genomes]
rs73311400	1.00[ASN][1000 genomes]
rs73313204	1.00[ASN][1000 genomes]
rs7817013	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7823896	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023204	chr8:110169573-110303085	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1031663	chr8:110177432-110303085	Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110186000-110192200	Weak transcription	HSMMtube	muscle
2	chr8:110187200-110187400	ZNF genes & repeats	Lung	lung

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