Variant report

No.	Distal block	Cell Line	Cell type
1	chr1:225540127..225543141-chr1:225544972..225548486,4	K562	blood:
2	chr1:225547542..225550580-chr1:225551460..225555926,4	MCF-7	breast:
3	chr1:225540074..225543141-chr1:225544972..225548275,3	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10495232	1.00[EUR][1000 genomes]
rs10495235	1.00[EUR][1000 genomes]
rs11805350	1.00[EUR][1000 genomes]
rs12239042	1.00[YRI][hapmap]
rs13376645	0.93[LWK][hapmap];1.00[MKK][hapmap];0.95[YRI][hapmap]
rs1480102	1.00[EUR][1000 genomes]
rs16844347	1.00[EUR][1000 genomes]
rs16844357	1.00[EUR][1000 genomes]
rs2153246	1.00[EUR][1000 genomes]
rs56918103	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6664529	1.00[EUR][1000 genomes]
rs6675157	1.00[EUR][1000 genomes]
rs6675162	1.00[EUR][1000 genomes]
rs6699883	1.00[EUR][1000 genomes]
rs73136911	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73136918	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7512125	1.00[EUR][1000 genomes]
rs7519130	1.00[EUR][1000 genomes]
rs7536912	1.00[EUR][1000 genomes]
rs7551251	1.00[EUR][1000 genomes]
rs769297	1.00[EUR][1000 genomes]
rs9803691	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv945672	chr1:225339532-225561349	Enhancers Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv873226	chr1:225347689-225555602	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:225547600-225548600	Enhancers	Liver	Liver

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