Variant report

Variant	rs66973173
Chromosome Location	chr1:76689130-76689131
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10493588	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17098431	0.88[EUR][1000 genomes]
rs17098434	0.88[EUR][1000 genomes]
rs58138109	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs58686996	0.88[EUR][1000 genomes]
rs67757470	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv870621	chr1:76620313-76997071	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:76686800-76692200	Weak transcription	Fetal Thymus	thymus
2	chr1:76687400-76695000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr1:76687600-76690000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr1:76689000-76693800	Enhancers	Primary neutrophils fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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