Variant report

Variant rs6697498
Chromosome Location chr1:86620599-86620600
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:86617400-86620600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr1:86617800-86621600 Weak transcription HSMM muscle
3 chr1:86619600-86620600 Enhancers Osteobl bone
4 chr1:86619800-86622400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr1:86620000-86620800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:86620000-86620800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
7 chr1:86620000-86620800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr1:86620000-86620800 Enhancers Primary monocytes fromperipheralblood blood
9 chr1:86620000-86621000 Enhancers NH-A brain
10 chr1:86620000-86623000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:86620200-86620600 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
12 chr1:86620200-86620600 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
13 chr1:86620200-86620600 Bivalent Enhancer Fetal Muscle Leg muscle
14 chr1:86620200-86620600 Enhancers NHDF-Ad bronchial
15 chr1:86620200-86621200 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:86620200-86621600 Bivalent Enhancer Fetal Brain Male brain
17 chr1:86620200-86622600 Flanking Active TSS Stomach Smooth Muscle stomach
18 chr1:86620200-86623000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
19 chr1:86620200-86623000 Active TSS Right Atrium heart
20 chr1:86620400-86620600 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
21 chr1:86620400-86620600 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
22 chr1:86620400-86620600 Bivalent Enhancer Adipose Nuclei Adipose
23 chr1:86620400-86620600 Bivalent/Poised TSS Fetal Brain Female brain
24 chr1:86620400-86620600 Bivalent Enhancer Fetal Heart heart
25 chr1:86620400-86620600 Bivalent Enhancer Rectal Smooth Muscle rectum
26 chr1:86620400-86620600 Bivalent/Poised TSS Right Ventricle heart
27 chr1:86620400-86620600 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
28 chr1:86620400-86620600 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
29 chr1:86620400-86620800 Flanking Bivalent TSS/Enh HUES48 Cell Line embryonic stem cell
30 chr1:86620400-86620800 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
31 chr1:86620400-86620800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:86620400-86620800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
33 chr1:86620400-86620800 Flanking Active TSS Fetal Lung lung
34 chr1:86620400-86620800 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
35 chr1:86620400-86621000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr1:86620400-86621000 Bivalent/Poised TSS Brain Angular Gyrus brain
37 chr1:86620400-86621000 Enhancers Esophagus oesophagus
38 chr1:86620400-86621000 Enhancers Pancreas Pancrea
39 chr1:86620400-86621000 Enhancers NHLF lung
40 chr1:86620400-86621200 Flanking Bivalent TSS/Enh iPS DF 6.9 Cell Line embryonic stem cell
41 chr1:86620400-86621200 Flanking Active TSS Colon Smooth Muscle Colon
42 chr1:86620400-86621200 Active TSS Duodenum Smooth Muscle Duodenum
43 chr1:86620400-86621200 Flanking Bivalent TSS/Enh NHEK skin
44 chr1:86620400-86621400 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:86620400-86621400 Bivalent Enhancer HMEC breast
46 chr1:86620400-86621800 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
47 chr1:86620400-86621800 Bivalent Enhancer Liver Liver
48 chr1:86620400-86622000 Enhancers Gastric stomach
49 chr1:86620400-86622000 Enhancers Spleen Spleen
50 chr1:86620400-86622200 Bivalent/Poised TSS H9 Cell Line embryonic stem cell

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