Variant report

Variant	rs67094823
Chromosome Location	chr6:64176252-64176253
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11752355	0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs11756680	0.83[EUR][1000 genomes]
rs1570313	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1923521	0.83[EUR][1000 genomes]
rs1923522	0.83[EUR][1000 genomes]
rs28396397	0.83[EUR][1000 genomes]
rs28635226	0.83[EUR][1000 genomes]
rs3857527	0.83[EUR][1000 genomes]
rs56950873	0.83[EUR][1000 genomes]
rs57519486	0.83[EUR][1000 genomes]
rs57899418	0.83[EUR][1000 genomes]
rs58779953	0.83[EUR][1000 genomes]
rs61580957	0.83[EUR][1000 genomes]
rs66500769	0.82[EUR][1000 genomes]
rs72880815	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72880852	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72880879	0.83[EUR][1000 genomes]
rs72880884	0.82[EUR][1000 genomes]
rs7767556	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019831	chr6:63279677-64230736	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:64171400-64177400	Weak transcription	Pancreas	Pancrea
2	chr6:64175400-64177600	Enhancers	Liver	Liver
3	chr6:64175800-64177600	Enhancers	HepG2	liver
4	chr6:64176200-64177200	Weak transcription	A549	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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