Variant report

Variant rs6727929
Chromosome Location chr2:48795109-48795110
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:48759000-48827600 Weak transcription Muscle Satellite Cultured Cells --
2 chr2:48767200-48807800 Weak transcription Aorta Aorta
3 chr2:48773000-48808800 Weak transcription Right Ventricle heart
4 chr2:48777200-48807800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr2:48779400-48800200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr2:48787800-48802200 Weak transcription Esophagus oesophagus
7 chr2:48788200-48795200 Weak transcription Right Atrium heart
8 chr2:48788200-48798200 Weak transcription Lung lung
9 chr2:48788400-48799400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr2:48788400-48804600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr2:48788600-48812000 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr2:48790000-48800000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr2:48793000-48795600 Enhancers Colon Smooth Muscle Colon
14 chr2:48793200-48796000 Enhancers Fetal Lung lung
15 chr2:48793600-48795400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr2:48793600-48795600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
17 chr2:48793600-48795600 Enhancers Fetal Stomach stomach
18 chr2:48793600-48796200 Enhancers Fetal Kidney kidney
19 chr2:48793600-48796200 Enhancers Placenta Placenta
20 chr2:48793800-48795200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr2:48793800-48795400 Enhancers Brain Hippocampus Middle brain
22 chr2:48793800-48795600 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr2:48793800-48795600 Enhancers Fetal Heart heart
24 chr2:48793800-48795800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
25 chr2:48793800-48795800 Enhancers Fetal Adrenal Gland Adrenal Gland
26 chr2:48793800-48796000 Enhancers Adipose Nuclei Adipose
27 chr2:48793800-48796000 Enhancers Fetal Muscle Leg muscle
28 chr2:48793800-48796000 Enhancers Rectal Smooth Muscle rectum
29 chr2:48794000-48795200 Enhancers Brain Inferior Temporal Lobe brain
30 chr2:48794000-48795400 Enhancers Duodenum Smooth Muscle Duodenum
31 chr2:48794000-48796000 Enhancers Brain Substantia Nigra brain
32 chr2:48794000-48807800 Weak transcription Psoas Muscle Psoas
33 chr2:48794200-48807800 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr2:48794400-48795600 Enhancers Osteobl bone
35 chr2:48794400-48796200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr2:48794400-48799600 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr2:48794400-48807800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr2:48794400-48812000 Weak transcription H1 Cell Line embryonic stem cell
39 chr2:48794400-48827200 Weak transcription NHDF-Ad bronchial
40 chr2:48794600-48795200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr2:48794600-48796400 Enhancers Placenta Amnion Placenta Amnion
42 chr2:48794600-48811200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:48794800-48795400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
44 chr2:48794800-48795600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
45 chr2:48794800-48796200 Enhancers Ovary ovary
46 chr2:48794800-48798200 Weak transcription Fetal Muscle Trunk muscle
47 chr2:48795000-48795400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr2:48795000-48795400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr2:48795000-48795600 Enhancers HSMMtube muscle
50 chr2:48795000-48796200 Genic enhancers Stomach Smooth Muscle stomach

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