The 2.0 version of rSNPBase

Variant report

Variant rs6734291
Chromosome Location chr2:33450618-33450619
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33403800-33489800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:33414600-33455400 Weak transcription Fetal Stomach stomach
3 chr2:33436800-33455000 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr2:33442600-33452200 Weak transcription Fetal Muscle Leg muscle
5 chr2:33442600-33467600 Weak transcription Ovary ovary
6 chr2:33442800-33453400 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr2:33442800-33471400 Weak transcription Psoas Muscle Psoas
8 chr2:33446000-33455000 Weak transcription Fetal Kidney kidney
9 chr2:33446400-33451200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr2:33446400-33452600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr2:33446600-33451200 Weak transcription K562 blood
12 chr2:33446600-33454800 Weak transcription A549 lung
13 chr2:33446600-33461200 Weak transcription HUVEC blood vessel
14 chr2:33446800-33461200 Weak transcription Fetal Lung lung
15 chr2:33447400-33468200 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr2:33447600-33452600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr2:33447800-33451400 Weak transcription Aorta Aorta
18 chr2:33448200-33450800 Weak transcription Liver Liver
19 chr2:33448400-33461400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr2:33448600-33451400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr2:33449200-33454600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr2:33449200-33456200 Weak transcription Stomach Smooth Muscle stomach
23 chr2:33449400-33453400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr2:33449400-33454600 Weak transcription NHLF lung
25 chr2:33449400-33454600 Weak transcription Osteobl bone
26 chr2:33449400-33461400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr2:33449400-33466200 Weak transcription Fetal Heart heart
28 chr2:33449400-33475400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr2:33449600-33454600 Weak transcription NHDF-Ad bronchial
30 chr2:33450400-33450800 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr2:33450400-33450800 Genic enhancers Muscle Satellite Cultured Cells --
32 chr2:33450400-33450800 Strong transcription Left Ventricle heart
33 chr2:33450400-33450800 ZNF genes & repeats NHEK skin
34 chr2:33450400-33452000 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr2:33450600-33450800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr2:33450600-33450800 ZNF genes & repeats NH-A brain

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Last update: Aug 31, 2015