Variant report

Variant	rs6737103
Chromosome Location	chr2:128085305-128085306
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:128047846..128050697-chr2:128084893..128086407,2	K562	blood:

Variant related genes	Relation type
ENSG00000163161	Chromatin interaction

Extended variants
information (count: 75 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:75)

rs_ID	r²[population]
rs1803541	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2069934	1.00[CEU][hapmap]
rs3732210	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4150458	1.00[GIH][hapmap]
rs4150459	1.00[CEU][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs4150460	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4150468	1.00[EUR][1000 genomes]
rs4150480	1.00[CEU][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs4662574	0.86[EUR][1000 genomes]
rs55693032	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55871356	0.95[EUR][1000 genomes]
rs55926979	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs56000604	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56033800	0.95[EUR][1000 genomes]
rs56226037	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56287237	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56373535	1.00[EUR][1000 genomes]
rs56383408	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs58877895	1.00[EUR][1000 genomes]
rs6708102	1.00[CEU][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6755703	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845924	0.88[EUR][1000 genomes]
rs72845929	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72845937	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72845942	0.95[EUR][1000 genomes]
rs72845943	0.95[EUR][1000 genomes]
rs72845953	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845958	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845960	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845961	0.93[EUR][1000 genomes]
rs72845963	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845964	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845966	1.00[EUR][1000 genomes]
rs72845967	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845968	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845969	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845970	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845971	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845972	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845973	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72845978	1.00[EUR][1000 genomes]
rs72845980	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845983	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845984	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845985	0.80[EUR][1000 genomes]
rs72845988	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845989	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845992	1.00[EUR][1000 genomes]
rs72845995	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845996	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845998	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72845999	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72846001	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72848605	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72848607	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72848610	0.93[EUR][1000 genomes]
rs72848614	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72848617	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72848619	0.95[EUR][1000 genomes]
rs72848621	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72848623	0.95[EUR][1000 genomes]
rs72848624	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72848625	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72848626	0.95[EUR][1000 genomes]
rs72848627	0.95[EUR][1000 genomes]
rs72848628	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72848629	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72848630	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72848635	0.95[EUR][1000 genomes]
rs72848637	0.90[EUR][1000 genomes]
rs72848642	0.90[EUR][1000 genomes]
rs7559907	0.95[EUR][1000 genomes]
rs7581386	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7591595	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8179521	1.00[CEU][hapmap];0.85[TSI][hapmap];0.90[EUR][1000 genomes]

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:128058600-128085600	Strong transcription	Primary B cells from cord blood	blood
2	chr2:128059400-128109600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr2:128059800-128093000	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr2:128061600-128098200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
5	chr2:128061800-128096800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr2:128062000-128086600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr2:128062400-128094000	Strong transcription	Rectal Mucosa Donor 29	rectum
8	chr2:128062600-128089400	Strong transcription	Primary T helper cells fromperipheralblood	blood
9	chr2:128062800-128098000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
10	chr2:128063000-128089200	Strong transcription	Skeletal Muscle Female	skeletal muscle
11	chr2:128063400-128098400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr2:128063600-128091800	Strong transcription	Placenta	Placenta
13	chr2:128064200-128090000	Weak transcription	Psoas Muscle	Psoas
14	chr2:128065000-128100200	Weak transcription	Stomach Mucosa	stomach
15	chr2:128066400-128090600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
16	chr2:128068200-128092200	Weak transcription	Pancreas	Pancrea
17	chr2:128069000-128117000	Weak transcription	Small Intestine	intestine
18	chr2:128071600-128089000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
19	chr2:128072200-128090000	Weak transcription	Colonic Mucosa	Colon
20	chr2:128072200-128098200	Strong transcription	Primary monocytes fromperipheralblood	blood
21	chr2:128072200-128101400	Strong transcription	Monocytes-CD14+_RO01746	blood
22	chr2:128072200-128109600	Weak transcription	Esophagus	oesophagus
23	chr2:128072200-128111800	Weak transcription	K562	blood
24	chr2:128072600-128112000	Weak transcription	NHEK	skin
25	chr2:128073200-128088800	Weak transcription	H1 Cell Line	embryonic stem cell
26	chr2:128074800-128106800	Weak transcription	Spleen	Spleen
27	chr2:128076000-128095400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
28	chr2:128076600-128102800	Weak transcription	Hela-S3	cervix
29	chr2:128077000-128090000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
30	chr2:128077000-128094000	Weak transcription	Gastric	stomach
31	chr2:128077000-128116200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr2:128077200-128089200	Weak transcription	Lung	lung
33	chr2:128077200-128122800	Weak transcription	Aorta	Aorta
34	chr2:128077800-128086600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr2:128078200-128093400	Strong transcription	Dnd41	blood
36	chr2:128078400-128097400	Strong transcription	Primary T cells fromperipheralblood	blood
37	chr2:128078600-128096200	Strong transcription	Fetal Thymus	thymus
38	chr2:128078600-128096400	Strong transcription	Fetal Intestine Large	intestine
39	chr2:128078600-128109600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr2:128078800-128092400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
41	chr2:128078800-128095600	Weak transcription	Pancreatic Islets	Pancreatic Islet
42	chr2:128078800-128096800	Strong transcription	Primary B cells from peripheral blood	blood
43	chr2:128078800-128105400	Weak transcription	HSMMtube	muscle
44	chr2:128079200-128088400	Weak transcription	Right Ventricle	heart
45	chr2:128079200-128094800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
46	chr2:128079200-128096600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr2:128079200-128097000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr2:128079200-128098000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr2:128079400-128107800	Weak transcription	Brain Inferior Temporal Lobe	brain
50	chr2:128079600-128086000	Weak transcription	Primary T killer memory cells from peripheral blood	blood

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