The 2.0 version of rSNPBase

Variant report

Variant rs6740342
Chromosome Location chr2:181909964-181909965
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:181901200-181912200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:181901400-181910000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr2:181901600-181911200 Weak transcription GM12878-XiMat blood
4 chr2:181902200-181926400 Weak transcription HSMM muscle
5 chr2:181902800-181934200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr2:181903000-181910200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr2:181903600-181918800 Weak transcription NHEK skin
8 chr2:181903800-181917000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr2:181903800-181934600 Weak transcription NH-A brain
10 chr2:181904200-181919200 Weak transcription Osteobl bone
11 chr2:181904400-181915600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr2:181904400-181934000 Weak transcription NHDF-Ad bronchial
13 chr2:181904400-181945400 Weak transcription Left Ventricle heart
14 chr2:181906400-181919400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr2:181907600-181917000 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr2:181907800-181910800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr2:181907800-181911000 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr2:181907800-181911000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr2:181908000-181911000 Weak transcription Primary hematopoietic stem cells blood
20 chr2:181908800-181910800 Enhancers Primary T helper cells fromperipheralblood blood
21 chr2:181909400-181910200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
22 chr2:181909400-181910600 Enhancers Brain Anterior Caudate brain
23 chr2:181909400-181911400 Enhancers Brain Cingulate Gyrus brain
24 chr2:181909400-181911800 Enhancers Primary T cells from cord blood blood
25 chr2:181909800-181910000 Enhancers Duodenum Smooth Muscle Duodenum
26 chr2:181909800-181910200 Enhancers Rectal Smooth Muscle rectum
27 chr2:181909800-181910400 Enhancers Primary T killer memory cells from peripheral blood blood
28 chr2:181909800-181910400 Enhancers Colon Smooth Muscle Colon
29 chr2:181909800-181910600 Enhancers Brain Germinal Matrix brain
30 chr2:181909800-181911200 Enhancers Brain Angular Gyrus brain
31 chr2:181909800-181911400 Enhancers Brain Substantia Nigra brain
32 chr2:181909800-181911800 Enhancers Brain Hippocampus Middle brain

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Last update: Aug 31, 2015