Variant report

Variant	rs6761219
Chromosome Location	chr2:181901021-181901022
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:181890931..181892991-chr2:181900599..181903348,2	K562	blood:
2	chr2:181890226..181892242-chr2:181899301..181901816,2	MCF-7	breast:
3	chr2:181863713..181866160-chr2:181900387..181902308,2	K562	blood:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10167039	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10172609	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10177379	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10179247	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10180373	0.90[ASN][1000 genomes]
rs10180999	0.90[ASN][1000 genomes]
rs10186928	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10190282	0.90[ASN][1000 genomes]
rs10203057	0.90[ASN][1000 genomes]
rs10203106	0.90[ASN][1000 genomes]
rs10206321	1.00[ASN][1000 genomes]
rs13389513	0.85[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs13396254	0.90[ASN][1000 genomes]
rs13399193	0.95[ASN][1000 genomes]
rs13406482	0.90[ASN][1000 genomes]
rs13409312	1.00[ASN][1000 genomes]
rs13418807	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13420090	0.90[ASN][1000 genomes]
rs13420526	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13420661	1.00[ASN][1000 genomes]
rs13425162	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13425730	1.00[ASN][1000 genomes]
rs13429008	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28887797	0.90[ASN][1000 genomes]
rs4077214	0.90[ASN][1000 genomes]
rs4618006	0.85[ASN][1000 genomes]
rs4618007	0.85[ASN][1000 genomes]
rs6706552	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6721173	0.90[ASN][1000 genomes]
rs6722001	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:181857800-181901200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr2:181886000-181901200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr2:181890800-181901200	Weak transcription	Primary T helper cells PMA-I stimulated	--
4	chr2:181893400-181901200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr2:181895000-181904000	Weak transcription	Left Ventricle	heart
6	chr2:181897400-181901400	Weak transcription	NH-A	brain
7	chr2:181897600-181901600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr2:181899800-181901600	Weak transcription	A549	lung
9	chr2:181900600-181903400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr2:181900600-181904400	Enhancers	NHLF	lung
11	chr2:181900800-181904200	Enhancers	Osteobl	bone
12	chr2:181901000-181901600	Enhancers	GM12878-XiMat	blood
13	chr2:181901000-181901800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr2:181901000-181903200	Enhancers	HMEC	breast
15	chr2:181901000-181903400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
16	chr2:181901000-181903600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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