The 2.0 version of rSNPBase

Variant report

Variant rs6761796
Chromosome Location chr2:48796966-48796967
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:48759000-48827600 Weak transcription Muscle Satellite Cultured Cells --
2 chr2:48767200-48807800 Weak transcription Aorta Aorta
3 chr2:48773000-48808800 Weak transcription Right Ventricle heart
4 chr2:48777200-48807800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr2:48779400-48800200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr2:48787800-48802200 Weak transcription Esophagus oesophagus
7 chr2:48788200-48798200 Weak transcription Lung lung
8 chr2:48788400-48799400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr2:48788400-48804600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr2:48788600-48812000 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr2:48790000-48800000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr2:48794000-48807800 Weak transcription Psoas Muscle Psoas
13 chr2:48794200-48807800 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr2:48794400-48799600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr2:48794400-48807800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr2:48794400-48812000 Weak transcription H1 Cell Line embryonic stem cell
17 chr2:48794400-48827200 Weak transcription NHDF-Ad bronchial
18 chr2:48794600-48811200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr2:48794800-48798200 Weak transcription Fetal Muscle Trunk muscle
20 chr2:48795400-48798200 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr2:48795400-48799200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr2:48795400-48799400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr2:48795400-48799400 Weak transcription Brain Hippocampus Middle brain
24 chr2:48795400-48812000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr2:48795400-48814200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr2:48795600-48797600 Weak transcription Colon Smooth Muscle Colon
27 chr2:48795600-48798600 Weak transcription Fetal Heart heart
28 chr2:48795600-48798600 Weak transcription HSMMtube muscle
29 chr2:48795600-48800000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr2:48795600-48800000 Weak transcription Fetal Stomach stomach
31 chr2:48795600-48808000 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr2:48795600-48826000 Weak transcription Fetal Intestine Small intestine
33 chr2:48795800-48799800 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr2:48795800-48800000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr2:48796000-48798000 Weak transcription Fetal Muscle Leg muscle
36 chr2:48796000-48798200 Weak transcription Rectal Smooth Muscle rectum
37 chr2:48796000-48799600 Weak transcription Fetal Lung lung
38 chr2:48796200-48797200 Weak transcription Placenta Placenta
39 chr2:48796200-48797600 Active TSS Adipose Nuclei Adipose
40 chr2:48796200-48798200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr2:48796200-48798200 Weak transcription Ovary ovary
42 chr2:48796200-48798400 Weak transcription Stomach Smooth Muscle stomach
43 chr2:48796200-48799400 Weak transcription Fetal Kidney kidney
44 chr2:48796200-48800000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr2:48796200-48801600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr2:48796200-48807800 Weak transcription Left Ventricle heart
47 chr2:48796400-48797000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr2:48796400-48797000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr2:48796400-48797600 Weak transcription Placenta Amnion Placenta Amnion
50 chr2:48796400-48799400 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015