Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs13076408	0.89[ASN][1000 genomes]
rs13099080	0.89[ASN][1000 genomes]
rs1603984	0.82[EUR][1000 genomes]
rs1603986	0.81[EUR][1000 genomes]
rs34850898	0.82[EUR][1000 genomes]
rs35396731	0.89[ASN][1000 genomes]
rs35806066	0.94[ASN][1000 genomes]
rs36023080	0.95[ASN][1000 genomes]
rs36109861	0.89[ASN][1000 genomes]
rs4858705	0.82[EUR][1000 genomes]
rs56103690	0.89[ASN][1000 genomes]
rs56104647	0.89[ASN][1000 genomes]
rs57828525	0.89[ASN][1000 genomes]
rs6550950	0.82[EUR][1000 genomes]
rs66831722	0.82[EUR][1000 genomes]
rs6771604	0.89[ASN][1000 genomes]
rs6778399	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67987013	0.92[ASN][1000 genomes]
rs6804869	0.89[ASN][1000 genomes]
rs71311525	0.89[ASN][1000 genomes]
rs73049948	0.94[ASN][1000 genomes]
rs7611139	0.89[ASN][1000 genomes]
rs7622091	0.83[EUR][1000 genomes]
rs7636344	0.89[ASN][1000 genomes]
rs9812604	0.89[ASN][1000 genomes]
rs9869089	0.89[ASN][1000 genomes]
rs9877729	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs6763490	TOP2B	cis	parietal	SCAN

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:25147000-25147800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr3:25147000-25147800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr3:25147200-25147800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr3:25147600-25152200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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