Variant report

Variant	rs6777169
Chromosome Location	chr3:42849148-42849149
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:42834430..42837380-chr3:42848485..42850165,2	K562	blood:

rs_ID	r²[population]
rs6778695	0.83[AMR][1000 genomes]
rs7634974	0.98[AFR][1000 genomes];0.83[AMR][1000 genomes]

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:42846800-42856400	Weak transcription	Right Atrium	heart
2	chr3:42847000-42851000	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr3:42847000-42852200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr3:42847000-42852400	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr3:42847200-42849400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr3:42847200-42850000	Weak transcription	Placenta	Placenta
7	chr3:42847200-42850200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr3:42847200-42852000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr3:42847200-42852200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr3:42847200-42852200	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr3:42847200-42852400	Weak transcription	Pancreas	Pancrea
12	chr3:42847200-42856400	Weak transcription	NHEK	skin
13	chr3:42847400-42852800	Weak transcription	Fetal Heart	heart
14	chr3:42847400-42852800	Weak transcription	Stomach Mucosa	stomach
15	chr3:42847400-42856200	Weak transcription	Colonic Mucosa	Colon
16	chr3:42847600-42852200	Weak transcription	K562	blood
17	chr3:42848400-42849400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr3:42848800-42849200	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr3:42848800-42849400	Enhancers	ES-I3 Cell Line	embryonic stem cell
20	chr3:42848800-42849600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr3:42849000-42849200	Enhancers	iPS-18 Cell Line	embryonic stem cell
22	chr3:42849000-42849200	Enhancers	iPS-20b Cell Line	embryonic stem cell
23	chr3:42849000-42852200	Weak transcription	HepG2	liver

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