Variant report

Variant	rs67870530
Chromosome Location	chr7:124591878-124591879
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:124584280..124585909-chr7:124591798..124594072,2	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10224463	0.81[EUR][1000 genomes]
rs10226033	0.81[EUR][1000 genomes]
rs10233596	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10240673	0.81[EUR][1000 genomes]
rs10253613	0.81[EUR][1000 genomes]
rs10464529	0.81[EUR][1000 genomes]
rs10954065	0.80[ASN][1000 genomes]
rs1383748	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28622327	0.81[EUR][1000 genomes]
rs28728448	0.81[EUR][1000 genomes]
rs28844358	0.84[EUR][1000 genomes]
rs36045816	0.84[EUR][1000 genomes]
rs4473974	0.82[EUR][1000 genomes]
rs55964341	0.81[EUR][1000 genomes]
rs56313563	0.81[EUR][1000 genomes]
rs56321835	0.81[EUR][1000 genomes]
rs56356267	0.84[EUR][1000 genomes]
rs58618031	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59379598	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs59673207	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62478792	0.99[ASN][1000 genomes]
rs66492217	0.82[EUR][1000 genomes]
rs66665074	0.84[EUR][1000 genomes]
rs66922607	0.82[EUR][1000 genomes]
rs67146030	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs67585224	0.81[EUR][1000 genomes]
rs67939974	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs68091803	0.81[EUR][1000 genomes]
rs6943653	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429809	chr7:123937674-124835925	Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
2	nsv608342	chr7:124549573-124600505	Active TSS Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	nsv1016655	chr7:124575684-124684279	Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
4	nsv1032336	chr7:124590688-124673373	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	nsv1025873	chr7:124591433-124668423	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
6	esv2761363	chr7:124591433-124673373	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
7	nsv1034654	chr7:124591433-124673373	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:124591600-124594800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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