Variant report

Variant	rs6787314
Chromosome Location	chr3:142982694-142982695
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:142980196..142982777-chr3:142995124..142996668,2	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs58149428	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949288	chr3:142793323-143585882	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:142963600-142995400	Weak transcription	Primary T cells from cord blood	blood
2	chr3:142973000-143017600	Weak transcription	Primary B cells from cord blood	blood
3	chr3:142973800-142984400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr3:142975800-142985600	Weak transcription	Ovary	ovary
5	chr3:142976000-142984400	Weak transcription	Aorta	Aorta
6	chr3:142980800-142995800	Weak transcription	Fetal Thymus	thymus
7	chr3:142981400-142986000	Weak transcription	Brain Hippocampus Middle	brain
8	chr3:142982200-142983800	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr3:142982400-142983400	Enhancers	GM12878-XiMat	blood
10	chr3:142982400-142984000	Weak transcription	Brain Inferior Temporal Lobe	brain
11	chr3:142982400-142984000	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr3:142982400-142984000	Enhancers	Dnd41	blood
13	chr3:142982400-142984200	Weak transcription	Primary monocytes fromperipheralblood	blood
14	chr3:142982400-142984200	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr3:142982400-142990200	Weak transcription	Rectal Smooth Muscle	rectum
16	chr3:142982600-142984200	Weak transcription	Brain Substantia Nigra	brain
17	chr3:142982600-142984400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
18	chr3:142982600-142984400	Weak transcription	Fetal Stomach	stomach
19	chr3:142982600-142985000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr3:142982600-142985200	Enhancers	HMEC	breast
21	chr3:142982600-142986800	Enhancers	Breast Myoepithelial Primary Cells	Breast

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