The 2.0 version of rSNPBase

Variant report

Variant rs67889619
Chromosome Location chr1:220971073-220971074
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220961000-220971200 Weak transcription Spleen Spleen
2 chr1:220961000-220973400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:220961000-220976800 Weak transcription Ovary ovary
4 chr1:220961000-220978200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:220961000-220982200 Weak transcription Brain Substantia Nigra brain
6 chr1:220961200-220971200 Weak transcription Stomach Smooth Muscle stomach
7 chr1:220961400-220983800 Weak transcription Esophagus oesophagus
8 chr1:220961600-220975000 Weak transcription Brain Angular Gyrus brain
9 chr1:220961600-220975200 Weak transcription Brain Cingulate Gyrus brain
10 chr1:220961600-220983600 Weak transcription Pancreas Pancrea
11 chr1:220961800-220971600 Weak transcription Brain Germinal Matrix brain
12 chr1:220961800-220972000 Weak transcription Rectal Smooth Muscle rectum
13 chr1:220961800-220974200 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr1:220961800-220979800 Weak transcription Right Atrium heart
15 chr1:220961800-220981400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr1:220961800-220981600 Weak transcription Fetal Muscle Trunk muscle
17 chr1:220961800-220983800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr1:220962000-220975000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:220964000-220974000 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:220964800-220972000 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr1:220964800-220978400 Weak transcription Primary B cells from cord blood blood
22 chr1:220965000-220972600 Weak transcription Colonic Mucosa Colon
23 chr1:220965000-220972600 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr1:220965000-220980000 Weak transcription Fetal Muscle Leg muscle
25 chr1:220965200-220971600 Weak transcription Right Ventricle heart
26 chr1:220965200-220979600 Weak transcription Gastric stomach
27 chr1:220965200-220985400 Weak transcription Aorta Aorta
28 chr1:220965400-220971200 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr1:220965400-220971600 Weak transcription Left Ventricle heart
30 chr1:220965400-220972400 Weak transcription Brain Anterior Caudate brain
31 chr1:220965400-220982200 Weak transcription Brain Inferior Temporal Lobe brain
32 chr1:220965600-220983600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr1:220965800-220971800 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr1:220965800-220983800 Weak transcription Fetal Lung lung
35 chr1:220966400-220996000 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr1:220966600-220982400 Strong transcription Primary monocytes fromperipheralblood blood
37 chr1:220966800-220985200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr1:220967600-220976400 Strong transcription Adipose Nuclei Adipose
39 chr1:220967600-220983800 Weak transcription Psoas Muscle Psoas
40 chr1:220968200-220977200 Strong transcription Primary neutrophils fromperipheralblood blood
41 chr1:220968800-220971600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr1:220969600-220971600 Enhancers Fetal Heart heart
43 chr1:220969600-220972200 Strong transcription Hela-S3 cervix
44 chr1:220969600-220975600 Strong transcription HUES48 Cell Line embryonic stem cell
45 chr1:220969600-220978800 Strong transcription HepG2 liver
46 chr1:220969800-220972800 Strong transcription iPS-18 Cell Line embryonic stem cell
47 chr1:220969800-220974200 Strong transcription HUES64 Cell Line embryonic stem cell
48 chr1:220969800-220976400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr1:220969800-220976600 Strong transcription iPS-20b Cell Line embryonic stem cell
50 chr1:220970000-220971200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015