The 2.0 version of rSNPBase

Variant report

Variant rs6822668
Chromosome Location chr4:47853843-47853844
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:47838800-47859800 Weak transcription Hela-S3 cervix
2 chr4:47839800-47874800 Weak transcription A549 lung
3 chr4:47839800-47875000 Weak transcription Brain Angular Gyrus brain
4 chr4:47839800-47885800 Weak transcription Lung lung
5 chr4:47840000-47854600 Weak transcription Placenta Amnion Placenta Amnion
6 chr4:47840000-47855600 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr4:47840000-47874600 Weak transcription Brain Substantia Nigra brain
8 chr4:47840000-47874800 Weak transcription Brain Cingulate Gyrus brain
9 chr4:47840000-47875400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr4:47840000-47875600 Weak transcription Rectal Smooth Muscle rectum
11 chr4:47840000-47886800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr4:47840200-47854000 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr4:47840200-47855600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr4:47840200-47866600 Weak transcription Esophagus oesophagus
15 chr4:47840200-47867000 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr4:47840200-47869600 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr4:47840200-47874600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr4:47840200-47874800 Weak transcription Psoas Muscle Psoas
19 chr4:47840200-47881600 Weak transcription Stomach Mucosa stomach
20 chr4:47840200-47885200 Weak transcription Aorta Aorta
21 chr4:47840200-47885800 Weak transcription Pancreas Pancrea
22 chr4:47840400-47854200 Weak transcription NHLF lung
23 chr4:47840400-47855200 Weak transcription Colonic Mucosa Colon
24 chr4:47840400-47866600 Weak transcription Stomach Smooth Muscle stomach
25 chr4:47840400-47874600 Weak transcription Brain Hippocampus Middle brain
26 chr4:47840400-47874600 Weak transcription Fetal Brain Male brain
27 chr4:47840400-47875400 Weak transcription Small Intestine intestine
28 chr4:47840400-47875600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr4:47840600-47855800 Weak transcription Fetal Lung lung
30 chr4:47840600-47874800 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr4:47840600-47875200 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr4:47840800-47867600 Weak transcription Fetal Intestine Small intestine
33 chr4:47840800-47874600 Weak transcription Brain Germinal Matrix brain
34 chr4:47840800-47874800 Weak transcription H9 Cell Line embryonic stem cell
35 chr4:47840800-47875400 Weak transcription Right Ventricle heart
36 chr4:47841200-47874800 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr4:47841200-47874800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr4:47841400-47874600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr4:47841400-47875600 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr4:47841600-47874600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr4:47841800-47874600 Weak transcription Fetal Heart heart
42 chr4:47841800-47874600 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr4:47841800-47880000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr4:47843400-47874600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr4:47843800-47897000 Weak transcription ES-WA7 Cell Line embryonic stem cell
46 chr4:47845800-47873400 Weak transcription Fetal Brain Female brain
47 chr4:47846200-47859400 Weak transcription Ovary ovary
48 chr4:47846400-47875200 Weak transcription Fetal Muscle Leg muscle
49 chr4:47846600-47855600 Weak transcription Fetal Intestine Large intestine
50 chr4:47846600-47869800 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015