The 2.0 version of rSNPBase

Variant report

Variant rs684208
Chromosome Location chr12:10993697-10993698
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:10973600-11009600 Weak transcription HSMM muscle
2 chr12:10988000-10995400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr12:10988400-11006000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr12:10988400-11008400 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr12:10988600-10995600 Weak transcription Stomach Smooth Muscle stomach
6 chr12:10988800-11001600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr12:10989200-10999200 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr12:10989200-11008600 Weak transcription Brain Cingulate Gyrus brain
9 chr12:10989400-10995800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr12:10989400-11008200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr12:10989600-10999600 Weak transcription Primary T cells from cord blood blood
12 chr12:10989800-10995600 Weak transcription Ovary ovary
13 chr12:10989800-10999400 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr12:10989800-10999600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr12:10990000-10995400 Weak transcription Brain Hippocampus Middle brain
16 chr12:10990000-10999200 Weak transcription Pancreas Pancrea
17 chr12:10990000-11003800 Weak transcription Right Ventricle heart
18 chr12:10990000-11004000 Weak transcription Fetal Heart heart
19 chr12:10990000-11005400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr12:10990000-11005400 Weak transcription Psoas Muscle Psoas
21 chr12:10990000-11008400 Weak transcription Fetal Lung lung
22 chr12:10990200-10994800 Weak transcription Left Ventricle heart
23 chr12:10990200-10995400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr12:10990200-10995400 Weak transcription Adipose Nuclei Adipose
25 chr12:10990200-10999200 Weak transcription Fetal Muscle Leg muscle
26 chr12:10990200-11008400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr12:10990400-10995400 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr12:10991200-10999200 Weak transcription Fetal Stomach stomach
29 chr12:10991200-11000200 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr12:10991200-11007800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr12:10991200-11008000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr12:10991400-11010800 Weak transcription Rectal Smooth Muscle rectum
33 chr12:10991600-11002000 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr12:10992400-10994800 Weak transcription Primary hematopoietic stem cells blood
35 chr12:10993000-10995400 Weak transcription Aorta Aorta
36 chr12:10993200-11008000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr12:10993400-10995400 Weak transcription Lung lung
38 chr12:10993400-10995400 Weak transcription HSMMtube muscle
39 chr12:10993600-11007600 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015