The 2.0 version of rSNPBase

Variant report

Variant rs6863749
Chromosome Location chr5:60457627-60457628
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60456400-60458800 Active TSS Fetal Brain Male brain
2 chr5:60456600-60457800 Flanking Active TSS Adipose Nuclei Adipose
3 chr5:60456600-60459400 Active TSS Right Atrium heart
4 chr5:60456600-60459400 Active TSS GM12878-XiMat blood
5 chr5:60456600-60459600 Active TSS Psoas Muscle Psoas
6 chr5:60456800-60458000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr5:60456800-60459000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr5:60456800-60459000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
9 chr5:60456800-60459000 Active TSS NHLF lung
10 chr5:60456800-60459400 Active TSS HUES6 Cell Line embryonic stem cell
11 chr5:60456800-60459600 Active TSS HSMMtube muscle
12 chr5:60456800-60459800 Active TSS NHDF-Ad bronchial
13 chr5:60457000-60457800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr5:60457000-60458600 Active TSS Primary hematopoietic stem cells short term culture blood
15 chr5:60457000-60458600 Active TSS Rectal Mucosa Donor 29 rectum
16 chr5:60457000-60458600 Active TSS Rectal Mucosa Donor 31 rectum
17 chr5:60457000-60458600 Active TSS HUVEC blood vessel
18 chr5:60457000-60458600 Active TSS NH-A brain
19 chr5:60457000-60458800 Active TSS Muscle Satellite Cultured Cells --
20 chr5:60457000-60458800 Active TSS Hela-S3 cervix
21 chr5:60457000-60458800 Active TSS K562 blood
22 chr5:60457000-60459200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr5:60457000-60459200 Active TSS iPS-18 Cell Line embryonic stem cell
24 chr5:60457000-60459200 Active TSS Pancreatic Islets Pancreatic Islet
25 chr5:60457000-60459200 Active TSS Fetal Lung lung
26 chr5:60457000-60459200 Active TSS HMEC breast
27 chr5:60457000-60459400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
28 chr5:60457000-60459400 Active TSS Fetal Intestine Large intestine
29 chr5:60457000-60459400 Active TSS Fetal Muscle Leg muscle
30 chr5:60457000-60459600 Active TSS iPS-20b Cell Line embryonic stem cell
31 chr5:60457000-60459600 Active TSS Fetal Kidney kidney
32 chr5:60457000-60459800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr5:60457000-60459800 Active TSS HUES48 Cell Line embryonic stem cell
34 chr5:60457000-60460000 Active TSS HUES64 Cell Line embryonic stem cell
35 chr5:60457000-60460000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr5:60457000-60460200 Active TSS A549 lung
37 chr5:60457200-60457800 Flanking Active TSS Primary T cells from cord blood blood
38 chr5:60457200-60457800 Active TSS Skeletal Muscle Female skeletal muscle
39 chr5:60457200-60458000 Flanking Active TSS Primary hematopoietic stem cells blood
40 chr5:60457200-60458200 Flanking Active TSS Primary B cells from cord blood blood
41 chr5:60457200-60458400 Active TSS Dnd41 blood
42 chr5:60457200-60458600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
43 chr5:60457200-60458600 Active TSS Cortex derived primary cultured neurospheres brain
44 chr5:60457200-60458600 Active TSS Fetal Thymus thymus
45 chr5:60457200-60458600 Active TSS Thymus Thymus
46 chr5:60457200-60458600 Active TSS Osteobl bone
47 chr5:60457200-60458800 Active TSS Skeletal Muscle Male skeletal muscle
48 chr5:60457200-60458800 Active TSS NHEK skin
49 chr5:60457200-60459000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr5:60457200-60459000 Active TSS Placenta Placenta

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Last update: Aug 31, 2015