Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:150401196..150403539-chr6:150662242..150665059,2	K562	blood:
2	chr6:150465090..150467055-chr6:150662955..150664731,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs12055507	0.87[ASN][1000 genomes]
rs1737283	0.82[EUR][1000 genomes]
rs1890519	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1890520	0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2344747	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4368826	0.82[EUR][1000 genomes]
rs583250	0.81[EUR][1000 genomes]
rs585801	0.81[EUR][1000 genomes]
rs61650392	0.87[ASN][1000 genomes]
rs623829	0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs623882	0.86[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs62434569	0.87[ASN][1000 genomes]
rs628496	0.85[ASN][1000 genomes]
rs654694	0.81[EUR][1000 genomes]
rs6901397	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6914347	0.87[EUR][1000 genomes]
rs6915103	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6940067	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs868247	0.86[ASN][1000 genomes]
rs884678	0.88[ASN][1000 genomes]
rs884679	0.86[ASN][1000 genomes]
rs9371954	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9371955	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9383792	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9383793	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9384412	0.87[ASN][1000 genomes]
rs9397882	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830843	chr6:150517411-150691173	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	esv2763602	chr6:150581193-150720666	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150662800-150664200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr6:150662800-150664400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr6:150663000-150663200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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