Variant report
| Variant | rs6944043 |
|---|---|
| Chromosome Location | chr7:104116713-104116714 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr7:104116326..104118271-chr7:104120490..104122144,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:11)
| rs_ID | r2[population] |
|---|---|
| rs10275118 | 1.00[CEU][hapmap] |
| rs13224644 | 1.00[CEU][hapmap] |
| rs13227694 | 1.00[CEU][hapmap] |
| rs13230447 | 1.00[CEU][hapmap] |
| rs13232800 | 1.00[CEU][hapmap] |
| rs13235175 | 1.00[CEU][hapmap] |
| rs13237905 | 1.00[CEU][hapmap] |
| rs4406342 | 1.00[CEU][hapmap] |
| rs6944442 | 1.00[YRI][hapmap] |
| rs6957023 | 1.00[CEU][hapmap] |
| rs7803448 | 0.87[YRI][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv888925 | chr7:104047599-104170560 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
