Variant report

Variant	rs6944720
Chromosome Location	chr7:122186550-122186551
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10228901	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs10229791	1.00[AMR][1000 genomes]
rs10235266	1.00[YRI][hapmap]
rs10238335	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10238929	1.00[AMR][1000 genomes]
rs10243551	0.87[YRI][hapmap];1.00[AMR][1000 genomes]
rs10244187	1.00[AMR][1000 genomes]
rs10244718	1.00[YRI][hapmap]
rs10248746	1.00[AMR][1000 genomes]
rs10250037	1.00[AMR][1000 genomes]
rs10254479	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10257455	0.88[YRI][hapmap];1.00[AMR][1000 genomes]
rs10257593	0.88[YRI][hapmap];1.00[AMR][1000 genomes]
rs10263672	0.88[YRI][hapmap];1.00[AMR][1000 genomes]
rs10267961	1.00[AMR][1000 genomes]
rs10268190	0.87[YRI][hapmap]
rs10274143	1.00[AMR][1000 genomes]
rs10278021	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs13221540	0.88[YRI][hapmap]
rs13237142	0.88[YRI][hapmap]
rs13239569	0.88[YRI][hapmap]
rs28517374	1.00[AMR][1000 genomes]
rs4283984	0.87[YRI][hapmap]
rs6949494	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs6963572	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs7789775	0.88[YRI][hapmap]
rs7792270	1.00[AMR][1000 genomes]
rs7798392	1.00[AMR][1000 genomes]
rs7810196	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017029	chr7:121958574-122338623	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:122183200-122192400	Weak transcription	Fetal Lung	lung
2	chr7:122184400-122226000	Weak transcription	Left Ventricle	heart
3	chr7:122184600-122197400	Weak transcription	Lung	lung
4	chr7:122184800-122186800	Weak transcription	Ovary	ovary
5	chr7:122184800-122197200	Weak transcription	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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