The 2.0 version of rSNPBase

Variant report

Variant rs6955349
Chromosome Location chr7:104601236-104601237
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:104584600-104619000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr7:104587200-104623600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr7:104591600-104604600 Weak transcription Fetal Kidney kidney
4 chr7:104595600-104605600 Enhancers Primary monocytes fromperipheralblood blood
5 chr7:104597200-104608200 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr7:104597800-104606200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr7:104598000-104601600 Weak transcription Right Atrium heart
8 chr7:104598000-104602800 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr7:104598000-104603000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr7:104598000-104603400 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr7:104598000-104619800 Weak transcription Primary T cells from cord blood blood
12 chr7:104598000-104621600 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr7:104598200-104611600 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr7:104598200-104620800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr7:104598200-104621400 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr7:104598200-104623000 Weak transcription Primary T cells fromperipheralblood blood
17 chr7:104598400-104607600 Weak transcription HSMM muscle
18 chr7:104599000-104617200 Weak transcription Gastric stomach
19 chr7:104599200-104603800 Weak transcription HepG2 liver
20 chr7:104599400-104601400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr7:104599400-104601400 Weak transcription Fetal Lung lung
22 chr7:104599400-104601400 Weak transcription Stomach Smooth Muscle stomach
23 chr7:104599400-104601400 Weak transcription NHDF-Ad bronchial
24 chr7:104599400-104601600 Weak transcription Colonic Mucosa Colon
25 chr7:104599400-104601600 Weak transcription Lung lung
26 chr7:104599400-104602600 Weak transcription Colon Smooth Muscle Colon
27 chr7:104599400-104603800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr7:104599400-104604200 Weak transcription Rectal Smooth Muscle rectum
29 chr7:104599600-104603200 Weak transcription Fetal Stomach stomach
30 chr7:104600600-104601600 Enhancers Primary B cells from cord blood blood
31 chr7:104600600-104603600 Enhancers Primary hematopoietic stem cells short term culture blood
32 chr7:104601000-104601800 Enhancers Thymus Thymus
33 chr7:104601000-104602000 Enhancers Fetal Intestine Large intestine
34 chr7:104601000-104602800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr7:104601000-104604000 Enhancers GM12878-XiMat blood
36 chr7:104601000-104604600 Enhancers Primary hematopoietic stem cells blood
37 chr7:104601000-104604600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr7:104601000-104604600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr7:104601000-104605400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr7:104601000-104605400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
41 chr7:104601200-104601400 Enhancers Skeletal Muscle Male skeletal muscle
42 chr7:104601200-104601600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
43 chr7:104601200-104601600 Enhancers Brain Anterior Caudate brain
44 chr7:104601200-104601800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr7:104601200-104601800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
46 chr7:104601200-104601800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
47 chr7:104601200-104601800 Enhancers Adipose Nuclei Adipose
48 chr7:104601200-104601800 Enhancers Brain Angular Gyrus brain
49 chr7:104601200-104601800 Enhancers Brain Cingulate Gyrus brain
50 chr7:104601200-104601800 Enhancers Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015