Variant report

Variant	rs6966224
Chromosome Location	chr7:104347312-104347313
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10244859	0.89[CEU][hapmap]
rs10464615	0.93[CEU][hapmap]
rs12531723	0.92[CEU][hapmap]
rs12534285	0.85[EUR][1000 genomes]
rs12535033	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs12536801	0.93[CEU][hapmap]
rs12705261	0.92[CEU][hapmap]
rs12705263	0.92[CEU][hapmap]
rs12705264	0.93[CEU][hapmap]
rs13241253	0.93[CEU][hapmap]
rs13242612	0.93[CEU][hapmap]
rs4255068	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs4419737	0.93[CEU][hapmap]
rs4624947	0.93[CEU][hapmap]
rs4730038	0.96[CEU][hapmap]
rs6952413	0.96[CEU][hapmap];1.00[YRI][hapmap]
rs6962309	0.91[CEU][hapmap]
rs7782285	0.83[EUR][1000 genomes]
rs7801294	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429790	chr7:104314049-104488049	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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