Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11991808	1.00[EUR][1000 genomes]
rs11993344	1.00[EUR][1000 genomes]
rs1351350	1.00[EUR][1000 genomes]
rs1378519	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1455577	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1480117	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1480123	1.00[EUR][1000 genomes]
rs2353365	1.00[EUR][1000 genomes]
rs28804670	1.00[EUR][1000 genomes]
rs2883147	1.00[EUR][1000 genomes]
rs6982424	1.00[EUR][1000 genomes]
rs7000089	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7003391	1.00[EUR][1000 genomes]
rs73266757	1.00[EUR][1000 genomes]
rs73266758	1.00[EUR][1000 genomes]
rs73266781	1.00[EUR][1000 genomes]
rs73268678	1.00[EUR][1000 genomes]
rs73268679	1.00[EUR][1000 genomes]
rs73268681	1.00[EUR][1000 genomes]
rs73270521	1.00[EUR][1000 genomes]
rs73270530	1.00[EUR][1000 genomes]
rs7816460	1.00[EUR][1000 genomes]
rs7823443	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7825429	1.00[EUR][1000 genomes]
rs7831801	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7837948	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018879	chr8:63281724-63937632	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv831341	chr8:63658694-63852213	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1033527	chr8:63673915-64073735	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	nsv890962	chr8:63708519-63812686	Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63801000-63801200	Flanking Active TSS	GM12878-XiMat	blood

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