Variant report

Variant	rs6990865
Chromosome Location	chr8:49594703-49594704
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49594282..49596793-chr8:49599195..49602109,2	K562	blood:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10090157	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10090819	0.85[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs10092718	0.93[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10097910	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs10101066	0.88[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10111821	0.94[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1126259	0.87[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11785748	0.95[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12155607	1.00[CHB][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12542203	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12547015	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12547603	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12547619	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12548278	0.83[JPT][hapmap]
rs13271216	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13276316	0.85[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs1482261	0.85[CHB][hapmap];0.94[JPT][hapmap];0.81[ASN][1000 genomes]
rs2384970	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2891648	0.85[CHB][hapmap];0.94[JPT][hapmap]
rs35243529	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4873084	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4873285	0.88[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4873287	0.83[ASN][1000 genomes]
rs4873288	1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55923266	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6984858	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7835152	0.81[CEU][hapmap];0.85[CHB][hapmap];0.94[JPT][hapmap];0.83[ASN][1000 genomes]
rs900238	1.00[CEU][hapmap];0.85[CHB][hapmap];0.94[JPT][hapmap];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9298058	0.88[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs966703	0.87[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49587200-49595400	Weak transcription	Right Atrium	heart
2	chr8:49587800-49595200	Weak transcription	Fetal Muscle Leg	muscle
3	chr8:49588000-49595200	Weak transcription	Fetal Stomach	stomach
4	chr8:49591200-49595400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr8:49592000-49595000	Weak transcription	Fetal Kidney	kidney
6	chr8:49592200-49595600	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr8:49592200-49596600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr8:49592200-49600600	Weak transcription	Lung	lung
9	chr8:49592600-49595400	Weak transcription	Primary hematopoietic stem cells	blood
10	chr8:49592600-49595400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
11	chr8:49592800-49595200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr8:49592800-49595400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr8:49593000-49595000	Weak transcription	HUVEC	blood vessel
14	chr8:49594400-49596800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
15	chr8:49594600-49595000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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