Variant report

Variant	rs699358
Chromosome Location	chr14:72465969-72465970
allele	A/C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs1009017	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11158926	0.83[ASN][1000 genomes]
rs11158927	0.98[ASN][1000 genomes]
rs11620690	0.97[ASN][1000 genomes]
rs11622507	0.93[ASN][1000 genomes]
rs11623492	0.95[ASN][1000 genomes]
rs11623535	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11625937	0.99[ASN][1000 genomes]
rs11627768	0.93[ASN][1000 genomes]
rs11628133	0.90[ASN][1000 genomes]
rs12148043	0.90[ASN][1000 genomes]
rs12883063	0.88[EUR][1000 genomes]
rs12897386	0.89[EUR][1000 genomes]
rs1476745	0.83[ASN][1000 genomes]
rs17105346	0.93[ASN][1000 genomes]
rs17105566	0.99[ASN][1000 genomes]
rs17105606	0.91[ASN][1000 genomes]
rs17768361	0.83[ASN][1000 genomes]
rs1987722	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1987723	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2010846	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2010850	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2238280	0.83[EUR][1000 genomes]
rs2332705	0.92[ASN][1000 genomes]
rs2332707	0.89[EUR][1000 genomes]
rs35727014	0.87[EUR][1000 genomes]
rs3784055	0.80[ASN][1000 genomes]
rs3784056	0.81[ASN][1000 genomes]
rs4048388	0.85[EUR][1000 genomes]
rs4243640	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4350510	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4354860	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902966	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58890880	0.92[ASN][1000 genomes]
rs59631889	0.92[ASN][1000 genomes]
rs60503142	0.93[ASN][1000 genomes]
rs6574037	0.85[EUR][1000 genomes]
rs72735952	0.90[ASN][1000 genomes]
rs72735955	0.97[ASN][1000 genomes]
rs72735956	0.97[ASN][1000 genomes]
rs8008678	0.88[EUR][1000 genomes]
rs8013467	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
2	nsv948800	chr14:72462557-73150701	Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72462800-72467200	Weak transcription	Right Ventricle	heart
2	chr14:72464000-72467200	Weak transcription	Left Ventricle	heart
3	chr14:72465600-72466600	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain

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