Variant report

Variant	rs7013425
Chromosome Location	chr8:49953085-49953086
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10435575	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10504073	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10957317	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10957363	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11990854	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12545097	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12680366	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13268440	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13270448	0.82[ASN][1000 genomes]
rs1511363	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1567555	0.85[EUR][1000 genomes]
rs1828495	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1858312	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1876717	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2137013	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2385127	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2385229	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2385230	0.85[ASN][1000 genomes]
rs4873093	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4873094	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4873095	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4873099	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4873100	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4873303	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4873306	0.81[AFR][1000 genomes]
rs4873308	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs4873310	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6983929	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6984804	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7005693	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7011891	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7835336	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs974781	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7013425	C8orf22	cis	Muscle Skeletal	GTEx

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49952000-49956800	Weak transcription	Psoas Muscle	Psoas
2	chr8:49952600-49955400	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr8:49952800-49955600	Weak transcription	Skeletal Muscle Male	skeletal muscle

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