Variant report

Variant	rs7017204
Chromosome Location	chr8:63761233-63761234
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10091675	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10099222	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10102627	0.84[AFR][1000 genomes]
rs10106468	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10283234	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28721349	0.84[AFR][1000 genomes]
rs55845492	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6999510	0.85[AFR][1000 genomes]
rs7000076	0.81[AFR][1000 genomes]
rs73256994	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73256996	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73256998	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73258775	0.84[AFR][1000 genomes]
rs73258778	0.84[AFR][1000 genomes]
rs73684094	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73684095	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018879	chr8:63281724-63937632	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv831341	chr8:63658694-63852213	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1033527	chr8:63673915-64073735	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	nsv890961	chr8:63708519-63773787	Weak transcription Active TSS Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv890962	chr8:63708519-63812686	Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63759000-63776400	Weak transcription	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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