Variant report

Variant rs7027930
Chromosome Location chr9:565917-565918
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:546600-569400 Weak transcription Esophagus oesophagus
2 chr9:547600-571200 Weak transcription Aorta Aorta
3 chr9:549800-569000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr9:549800-593800 Weak transcription Lung lung
5 chr9:552400-574000 Weak transcription Right Ventricle heart
6 chr9:555000-568400 Weak transcription Pancreas Pancrea
7 chr9:555400-568400 Weak transcription Left Ventricle heart
8 chr9:556800-567200 Weak transcription Duodenum Mucosa Duodenum
9 chr9:556800-567400 Weak transcription Stomach Mucosa stomach
10 chr9:559000-571000 Weak transcription Psoas Muscle Psoas
11 chr9:559000-573600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr9:561800-570000 Weak transcription Fetal Lung lung
13 chr9:563000-572600 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr9:563400-568400 Weak transcription Colonic Mucosa Colon
15 chr9:563800-567000 Weak transcription Fetal Intestine Large intestine
16 chr9:564000-569400 Weak transcription Brain Substantia Nigra brain
17 chr9:564400-566600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr9:564600-567800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr9:564600-569600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr9:564600-571000 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr9:564800-567000 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr9:564800-568600 Enhancers Primary B cells from peripheral blood blood
23 chr9:565000-567000 Weak transcription Brain Cingulate Gyrus brain
24 chr9:565000-567400 Weak transcription Brain Hippocampus Middle brain
25 chr9:565000-567400 Weak transcription Fetal Heart heart
26 chr9:565200-566000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr9:565400-566200 ZNF genes & repeats A549 lung
28 chr9:565800-566800 Weak transcription Fetal Muscle Trunk muscle
29 chr9:565800-571000 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr9:565800-571000 Weak transcription NHEK skin
31 chr9:565800-573800 Weak transcription HMEC breast
32 chr9:565800-574000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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