Variant report

Variant	rs7034781
Chromosome Location	chr9:15753528-15753529
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 250 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:244)

rs_ID	r²[population]
rs1009468	0.83[ASW][hapmap];0.94[CHB][hapmap];0.95[MEX][hapmap];0.85[TSI][hapmap]
rs10118359	0.82[EUR][1000 genomes]
rs10119975	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10121393	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10121591	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10122339	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10283865	0.83[CHB][hapmap]
rs10481557	0.85[CEU][hapmap]
rs10733295	0.96[CEU][hapmap];0.83[CHB][hapmap];0.81[CHD][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.83[YRI][hapmap];0.81[EUR][1000 genomes]
rs10733305	0.85[CEU][hapmap]
rs10738417	0.85[CEU][hapmap]
rs10756674	0.85[CEU][hapmap];0.82[MEX][hapmap];0.81[TSI][hapmap]
rs10756677	0.85[CEU][hapmap];0.94[CHB][hapmap];0.83[MEX][hapmap]
rs10756679	0.81[CEU][hapmap]
rs10756686	0.81[CEU][hapmap];0.88[CHB][hapmap];0.94[JPT][hapmap]
rs10756687	0.85[CEU][hapmap];0.89[CHB][hapmap];0.83[MEX][hapmap]
rs10756688	0.85[CEU][hapmap];0.94[CHB][hapmap];0.83[JPT][hapmap];0.82[MEX][hapmap]
rs10756689	0.85[CEU][hapmap];0.94[CHB][hapmap]
rs10756690	0.85[CEU][hapmap];0.89[CHB][hapmap]
rs10756691	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10756697	0.81[CEU][hapmap]
rs10756704	0.81[TSI][hapmap]
rs10756714	0.81[CEU][hapmap]
rs10810397	0.89[CEU][hapmap];0.83[YRI][hapmap]
rs10810399	0.85[CEU][hapmap]
rs10810401	0.85[CEU][hapmap]
rs10810402	0.82[CEU][hapmap];0.81[TSI][hapmap]
rs10810408	0.85[CEU][hapmap];0.86[MEX][hapmap]
rs10810416	0.96[CEU][hapmap]
rs10810419	0.96[CEU][hapmap]
rs10810424	0.82[EUR][1000 genomes]
rs10810426	0.96[CEU][hapmap];0.83[CHB][hapmap];0.90[YRI][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10810427	0.96[CEU][hapmap];0.89[CHB][hapmap];0.83[YRI][hapmap];0.81[EUR][1000 genomes]
rs10810428	0.85[CEU][hapmap];0.89[CHB][hapmap];0.86[MEX][hapmap];0.83[TSI][hapmap]
rs10810429	0.96[CEU][hapmap];0.88[CHB][hapmap];0.90[YRI][hapmap];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10810430	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10810438	0.92[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10810439	0.85[CEU][hapmap];0.81[TSI][hapmap];0.81[EUR][1000 genomes]
rs10810440	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10810442	0.94[CHB][hapmap];0.94[JPT][hapmap];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10810446	0.92[CEU][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10810455	0.85[CEU][hapmap]
rs10962066	0.85[CEU][hapmap];0.86[MEX][hapmap];0.80[TSI][hapmap]
rs10962070	0.85[CEU][hapmap]
rs10962098	0.85[CEU][hapmap];0.94[CHB][hapmap]
rs10962099	0.85[CEU][hapmap];0.94[CHB][hapmap]
rs10962110	0.82[CEU][hapmap]
rs10962118	0.82[AMR][1000 genomes]
rs10962121	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10962123	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10962125	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10962126	0.83[ASW][hapmap];0.96[CEU][hapmap];0.94[CHB][hapmap];0.91[CHD][hapmap];0.94[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];0.95[TSI][hapmap];0.86[YRI][hapmap];0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10962146	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10962147	0.92[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10962149	0.94[CHB][hapmap];0.94[JPT][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10962152	0.92[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10962153	0.89[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10962156	0.92[CEU][hapmap];0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10962170	0.94[CHB][hapmap]
rs11515218	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11521158	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1169478	0.88[CHB][hapmap];0.80[JPT][hapmap]
rs1169479	0.87[CHB][hapmap];0.80[JPT][hapmap]
rs1169480	0.94[CHB][hapmap];0.80[JPT][hapmap]
rs11793900	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12004358	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12340969	0.81[CEU][hapmap];0.89[CHB][hapmap];0.84[JPT][hapmap]
rs12341679	1.00[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.95[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12349323	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12352779	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12377371	0.92[CEU][hapmap];0.94[CHB][hapmap];0.98[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12378499	0.92[CEU][hapmap]
rs1328288	0.93[CHB][hapmap];0.84[JPT][hapmap]
rs13283620	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13287834	0.92[CEU][hapmap];0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13295778	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs13296276	0.94[EUR][1000 genomes]
rs13302398	0.82[AFR][1000 genomes]
rs1341734	0.82[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1341735	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1341737	0.86[MEX][hapmap]
rs1355171	0.96[CEU][hapmap];0.89[CHB][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.81[EUR][1000 genomes]
rs1355173	0.94[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1359953	0.94[CHB][hapmap];0.84[JPT][hapmap]
rs1396706	0.96[CEU][hapmap];0.94[CHB][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1396707	0.82[CEU][hapmap];0.82[CHB][hapmap];0.83[MEX][hapmap];0.83[TSI][hapmap]
rs1396708	0.82[CEU][hapmap]
rs1509310	0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs1533040	0.85[CEU][hapmap];0.89[CHB][hapmap];0.83[JPT][hapmap];0.83[MEX][hapmap]
rs1539171	0.89[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];0.83[GIH][hapmap];0.89[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1539172	0.92[CEU][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1539173	0.92[CEU][hapmap];0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1553728	0.82[CEU][hapmap];0.83[CHB][hapmap]
rs1572978	0.94[CHB][hapmap];0.83[YRI][hapmap]
rs169342	0.96[CEU][hapmap];0.94[CHB][hapmap]
rs183928	0.96[CEU][hapmap];0.94[CHB][hapmap]
rs1891211	0.83[CHB][hapmap]
rs1891212	0.80[JPT][hapmap]
rs192466	0.93[CEU][hapmap]
rs1970497	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1984246	0.83[CHB][hapmap];0.80[JPT][hapmap]
rs2055772	0.85[CEU][hapmap];0.86[MEX][hapmap]
rs2066292	0.89[ASW][hapmap];0.89[CHB][hapmap];0.81[CHD][hapmap];0.84[JPT][hapmap];0.81[LWK][hapmap]
rs2096121	0.82[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2153725	0.94[CHB][hapmap]
rs2153726	0.94[CHB][hapmap]
rs2153727	0.82[ASW][hapmap];0.94[CHB][hapmap];0.86[MEX][hapmap];0.85[TSI][hapmap]
rs2175080	0.93[CEU][hapmap];0.82[CHB][hapmap];0.81[GIH][hapmap];0.86[LWK][hapmap];0.95[MEX][hapmap];0.82[MKK][hapmap];0.98[TSI][hapmap];0.86[YRI][hapmap];0.80[AFR][1000 genomes];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2175082	0.88[CHB][hapmap];0.83[MEX][hapmap]
rs2185663	0.92[CEU][hapmap];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2185665	0.94[CHB][hapmap]
rs2382534	0.82[CEU][hapmap];0.82[CHB][hapmap]
rs2382540	0.92[CEU][hapmap];0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2382553	0.94[CHB][hapmap];0.83[YRI][hapmap]
rs276435	0.96[CEU][hapmap];0.88[CHB][hapmap];0.89[JPT][hapmap]
rs276436	0.96[CEU][hapmap];0.94[CHB][hapmap]
rs276448	0.96[CEU][hapmap];0.83[YRI][hapmap]
rs276449	0.96[CEU][hapmap];0.86[YRI][hapmap]
rs276453	0.96[CEU][hapmap]
rs276454	0.88[CEU][hapmap]
rs276455	0.96[CEU][hapmap]
rs2794634	0.94[CHB][hapmap];0.84[JPT][hapmap]
rs2794636	0.94[CHB][hapmap];0.84[JPT][hapmap]
rs2821545	0.83[ASW][hapmap];0.89[CEU][hapmap];0.86[LWK][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.83[YRI][hapmap]
rs28403566	0.86[AMR][1000 genomes]
rs28410434	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs28785887	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2891007	0.94[CHB][hapmap]
rs2987069	0.94[CHB][hapmap]
rs2987070	0.94[CHB][hapmap]
rs2987071	0.94[CHB][hapmap]
rs2987072	0.94[CHB][hapmap]
rs3008686	0.94[CHB][hapmap];0.84[JPT][hapmap]
rs3119699	0.92[CEU][hapmap]
rs34700988	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35057009	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs36013000	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36086644	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4146291	0.81[TSI][hapmap]
rs432452	0.96[CEU][hapmap];0.83[YRI][hapmap]
rs433849	0.92[CEU][hapmap]
rs442549	0.96[CEU][hapmap];0.83[YRI][hapmap]
rs451878	0.89[ASW][hapmap];0.96[CEU][hapmap];0.89[CHB][hapmap];0.95[TSI][hapmap];0.86[YRI][hapmap]
rs4740614	0.92[CEU][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.91[TSI][hapmap]
rs4740615	0.85[CEU][hapmap];0.83[MEX][hapmap];0.80[TSI][hapmap]
rs4740619	0.85[CEU][hapmap];0.88[CHB][hapmap];0.84[CHD][hapmap];0.83[JPT][hapmap];0.86[MEX][hapmap]
rs4740624	0.85[CEU][hapmap];0.81[TSI][hapmap];0.81[EUR][1000 genomes]
rs4741519	0.85[CEU][hapmap];0.94[CHB][hapmap];0.83[JPT][hapmap]
rs4741528	0.85[CEU][hapmap];0.94[CHB][hapmap];0.81[CHD][hapmap];0.83[MEX][hapmap]
rs4741534	0.82[CEU][hapmap];0.88[CHB][hapmap];0.83[MEX][hapmap];0.83[TSI][hapmap]
rs4741535	0.82[CEU][hapmap]
rs56401042	0.81[EUR][1000 genomes]
rs58517712	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62571268	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62571305	0.81[AMR][1000 genomes]
rs62573118	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6474931	0.85[CEU][hapmap];0.89[CHB][hapmap]
rs6474944	0.85[CEU][hapmap];0.88[CHB][hapmap];0.83[MEX][hapmap];0.81[TSI][hapmap]
rs6474945	0.85[CEU][hapmap];0.88[CHB][hapmap]
rs6474946	0.82[EUR][1000 genomes]
rs6474951	0.93[CEU][hapmap];0.82[CHB][hapmap];0.86[YRI][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6474952	0.93[CEU][hapmap];0.82[CHB][hapmap];0.81[GIH][hapmap];0.82[LWK][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.86[YRI][hapmap];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6474954	0.82[CEU][hapmap];0.88[CHB][hapmap];0.83[MEX][hapmap];0.83[TSI][hapmap]
rs6474962	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6474963	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6474964	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6474965	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6474966	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs6474967	0.86[MEX][hapmap];0.84[TSI][hapmap];0.89[EUR][1000 genomes]
rs7018872	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7019143	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7019205	0.94[CHB][hapmap];0.80[JPT][hapmap];0.95[MEX][hapmap];0.82[TSI][hapmap]
rs7019323	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7019851	0.92[CEU][hapmap];0.94[CHB][hapmap];0.94[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7023275	0.96[CEU][hapmap];0.89[CHB][hapmap];0.95[MEX][hapmap];0.93[TSI][hapmap]
rs7024640	0.82[CEU][hapmap];0.82[CHB][hapmap];0.82[MEX][hapmap];0.83[TSI][hapmap]
rs7025420	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7025669	0.85[CEU][hapmap];0.94[CHB][hapmap]
rs7027202	0.83[CHB][hapmap]
rs7028999	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7030846	0.81[EUR][1000 genomes]
rs7032457	0.83[ASW][hapmap];0.94[CHB][hapmap];0.95[MEX][hapmap];0.85[TSI][hapmap]
rs7032634	0.94[CHB][hapmap]
rs7032755	0.84[CHB][hapmap];0.83[JPT][hapmap];0.86[MEX][hapmap]
rs7034484	0.96[CEU][hapmap];0.93[CHB][hapmap];0.81[EUR][1000 genomes]
rs7035863	0.96[CEU][hapmap];0.83[CHB][hapmap];0.89[YRI][hapmap];0.80[EUR][1000 genomes]
rs7036172	0.85[CEU][hapmap]
rs7036285	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7036674	0.87[CEU][hapmap];0.94[CHB][hapmap];0.87[JPT][hapmap]
rs7036775	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7037662	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7037908	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7039881	0.82[YRI][hapmap]
rs7043770	0.92[CEU][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7045018	0.94[CHB][hapmap];0.94[JPT][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7046351	0.80[EUR][1000 genomes]
rs7047045	0.94[CHB][hapmap]
rs7388793	0.83[YRI][hapmap]
rs7389629	0.85[CEU][hapmap]
rs7467156	1.00[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap]
rs7467207	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap];0.86[MEX][hapmap];0.80[MKK][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs770191	0.88[ASW][hapmap];0.94[CHB][hapmap];0.86[LWK][hapmap];0.83[YRI][hapmap]
rs770200	0.83[YRI][hapmap]
rs770201	0.83[YRI][hapmap]
rs770207	0.83[YRI][hapmap]
rs770211	0.94[CHB][hapmap];0.84[JPT][hapmap]
rs770213	0.94[CHB][hapmap];0.84[JPT][hapmap]
rs770215	0.94[CHB][hapmap];0.80[JPT][hapmap]
rs770524	0.92[CEU][hapmap];0.83[YRI][hapmap]
rs7846970	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7847144	0.82[CEU][hapmap];0.82[CHB][hapmap];0.83[TSI][hapmap]
rs7848511	0.82[EUR][1000 genomes]
rs7853744	0.94[CHB][hapmap];0.90[MEX][hapmap];0.82[TSI][hapmap]
rs7859780	0.85[CEU][hapmap]
rs7860024	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7860528	0.89[CEU][hapmap];0.83[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7860869	0.92[CEU][hapmap];0.94[CHB][hapmap];0.83[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7860992	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7861802	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7863088	0.85[CEU][hapmap];0.89[CHB][hapmap];0.81[CHD][hapmap];0.83[JPT][hapmap]
rs7866641	0.94[CHB][hapmap];0.90[MEX][hapmap];0.83[TSI][hapmap]
rs7866894	0.80[AFR][1000 genomes]
rs7869624	1.00[ASW][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.95[MEX][hapmap];0.91[MKK][hapmap];0.89[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7872912	0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7873152	0.96[CEU][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.93[TSI][hapmap]
rs7874533	0.85[CEU][hapmap];0.81[MEX][hapmap];0.83[TSI][hapmap]
rs7875367	0.83[ASW][hapmap];0.96[CEU][hapmap];0.86[LWK][hapmap];0.95[MEX][hapmap];0.81[MKK][hapmap];0.93[TSI][hapmap];0.83[YRI][hapmap]
rs9298738	0.94[CHB][hapmap]
rs9298739	0.93[CHB][hapmap]
rs9298740	0.92[CEU][hapmap];0.94[CHB][hapmap];0.81[YRI][hapmap]
rs9298741	0.92[CEU][hapmap];0.94[CHB][hapmap];0.83[YRI][hapmap]
rs9406537	0.94[CHB][hapmap];0.90[MEX][hapmap];0.85[TSI][hapmap]
rs9406542	0.94[CHB][hapmap];0.80[YRI][hapmap]
rs9407648	0.94[CHB][hapmap]
rs9407649	0.94[CHB][hapmap]
rs9407650	0.94[CHB][hapmap]
rs9407651	0.94[CHB][hapmap];0.83[YRI][hapmap]
rs9407652	0.94[CHB][hapmap]
rs9407654	0.94[ASW][hapmap];0.94[CHB][hapmap];0.91[LWK][hapmap];0.86[MEX][hapmap];0.83[TSI][hapmap];0.83[YRI][hapmap]
rs9407657	0.94[CHB][hapmap];0.81[YRI][hapmap]
rs9407661	0.94[CHB][hapmap]
rs9407662	0.94[CHB][hapmap];0.82[YRI][hapmap]
rs954663	0.96[CEU][hapmap];0.82[CHB][hapmap];0.86[YRI][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs954664	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv892625	chr9:15326251-16064850	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
2	nsv892627	chr9:15397969-15909450	Enhancers Flanking Active TSS Strong transcription Weak transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
3	esv2752286	chr9:15578017-15794897	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv892632	chr9:15590116-15869845	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv892633	chr9:15604746-15889411	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
6	nsv892635	chr9:15731775-15876507	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs7034781	C9orf93	cis	cerebellum	SCAN
rs7034781	C9orf93	cis	parietal	SCAN
rs7034781	ADAMTSL1	cis	parietal	SCAN

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:15737000-15754000	Weak transcription	Gastric	stomach
2	chr9:15742600-15769600	Weak transcription	Psoas Muscle	Psoas
3	chr9:15747200-15759600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr9:15748000-15757600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr9:15748000-15758000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr9:15748600-15755200	Weak transcription	Primary hematopoietic stem cells	blood
7	chr9:15752800-15755800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Variant report

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